Variovorax sp. 38R: IG196_28295
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Entry
IG196_28295 CDS
T10235
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_28295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_28295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_28295
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_28295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QOF78163
LinkDB
All DBs
Position
complement(6089000..6090076)
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AA seq
358 aa
AA seq
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MRFIFKTSYDQDIRLARHGGHVLWYSLLVAFLLVAPWVIDEYWLAQLTFVLIYGIVGLGL
MLLAGFTGQFSIGHAAFLGTGAYTQGVLTNMGVPFPLALLASAALSAAVGVVVALPALRV
KGIYLGIATLSFGFIVEEVFARWESVTGGNAGLHVKAPQLFGWSLGSGEGFYFLCLVVAV
ISTLGILNLLRSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISAALAGLGGALYAHK
LSFISPDQFNILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLISMGKDWLPAVVGQA
PGLQGLVYGLVLIAFVLFEPLGLYGRWLKIRTWLQLFPFYRKGLFKRQKSFTKSDRLR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcatcttcaaaaccagctacgaccaggacatccgccttgcgcggcacggcggc
catgtgctctggtacagcctgctcgtggccttcctgctcgtcgcgccgtgggtcatcgac
gagtactggctcgcgcagctgaccttcgtgctcatctacggcatcgtcggcctggggttg
atgctgctggcgggcttcacggggcagttctccatcgggcatgcggcgtttctcggaacg
ggcgcgtacacgcagggcgtgctgaccaacatgggcgtgccgttcccgcttgcgctgctt
gcgtcggccgcgctgtcggcggcggtgggcgtggtggtggcattgccggcgctgcgcgtg
aagggcatctacctgggcatcgcgacgctgtcgttcggcttcatcgtcgaggaagtgttc
gcgcgctgggaaagcgtgacgggcggcaatgcgggcctgcacgtgaaggcgccgcagctc
ttcggctggtcgctgggctcgggcgaaggcttctactttctgtgcctggtggtcgcggtg
atctccacgctgggcatcctgaacctgctgcgttcgccgaccgggcgcgccttcgtggcg
atccgcgattcggagatttcggcgcagagcatgggcatccacctggcgcgctacaagacg
atgtcgttcgcgatctcggccgcgctcgcggggctcggcggcgcgctgtacgcgcacaag
ctgagcttcatctcgccggaccagttcaacatcctgcagtcgatcgacctgctgctgatg
gtggtgatcggcgggctgggctcggtgcacggcgcattcctcggcgcgatcttcctcatc
gcgatgccgcagttgatctcgatgggcaaggattggctgccggcggtcgtcggccaggca
cccggcctgcaggggctggtgtatggcctggtgctgatcgccttcgtgctgttcgagccg
ctcggcctttatgggcgttggctcaagatccgcacctggctgcagctcttcccgttctac
cgcaagggtttgttcaagcggcagaagtcgttcaccaaatcggaccgactgagatga
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