Variovorax sp. 38R: IG196_28940
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Entry
IG196_28940 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_28940
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_28940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_28940
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_28940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
DUF8088
Motif
Other DBs
NCBI-ProteinID:
QOF78276
LinkDB
All DBs
Position
6231022..6232353
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AA seq
443 aa
AA seq
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MTLKSLALTAALVVTTLGTALAPSLVQAQAKEQFFPLLVYRTGPYAPNGTPWANGKQDYI
KYVNATGGMNGVKIAYEECETGYATDKGVECYERLKGRPGVALFDPQATGITFALTDKVP
TDKIPLITLGYGLSASQDGGVFKWNFPLMGSYWTAADILIQHIGKKEGGMDKLKGKKIAL
VYHDSPFGKEPIPLLQERAKQNGFELSLIPVTAPGVEQKSAWLQVRQSRPDFVLLWGWGV
MNSTALKEAVATGYPREKMYGVWWAGAEPDVKDVGANAKGYNALALNTSGTQPKVIQDIL
KQVHDKGQGTGPKDEVGSVLYTRGVIIQMLTIEAVKRAQERFGKGKVMTGEQVRWGMENL
ALDQKKLDALGFSGVMRPVSTSCQDHMGSTWARVHTWDGAKWGGMSDWYEADSQIIKPMV
KAAADKYAGEKKLTRREAADCQS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacactgaaatcgctcgctctgaccgccgccctggtggtcaccaccctgggcacggcg
ctggcgccgtcgctggtccaggcgcaggccaaggaacagttcttcccgctgctggtctac
cgcaccggcccctacgcgcccaacggcacgccttgggccaacggcaagcaggactacatc
aagtacgtcaacgccaccggcggcatgaatggcgtgaagatcgcctacgaagaatgcgaa
accggctacgcgaccgacaagggcgtcgaatgctatgagcgcctgaagggccgcccgggc
gttgcgttgttcgacccgcaggccaccggcatcaccttcgcgctgaccgacaaagtgccc
accgacaagatcccgctcatcacgctgggctacggcctctcggcctcgcaagacggcggc
gtgttcaagtggaacttcccgctcatgggctcctactggaccgcggccgacatcctgatc
cagcacatcgggaaaaaagaaggcggcatggacaagctcaagggcaagaagatcgccctc
gtgtaccacgactcgccgttcggcaaggaaccgattccgctgctgcaggagcgcgccaag
cagaacggcttcgagctgtcgctcatcccggtgaccgcgcccggcgtggaacagaagtcg
gcctggctgcaggtgcgccagtcgcgtcctgacttcgtgctgctgtggggctggggcgtg
atgaactccaccgcgctgaaggaagccgtggccacgggctacccgcgcgagaagatgtac
ggcgtgtggtgggccggcgccgaacctgatgtgaaggacgtcggtgccaacgccaagggc
tacaacgcgctggcgctgaacacctcgggcacgcagccgaaggtgatccaggacatcctg
aagcaagtgcacgacaagggccagggcacgggtccgaaggacgaagtgggctcggtgctc
tacacgcgcggcgtgatcatccagatgctgaccatcgaggccgtcaagcgtgcgcaagag
cgcttcggcaagggcaaggtcatgaccggcgagcaagtgcgctggggcatggagaacctc
gcactcgaccagaagaagctcgacgccctcggcttctcgggcgtgatgcgtccggtgagc
acctcgtgccaggaccacatgggctcgacctgggcgcgtgtccacacctgggacggcgcg
aagtggggcggcatgtccgactggtatgaggccgacagccagatcatcaagccgatggtg
aaggctgctgccgacaagtacgcgggcgagaagaagctcacccgtcgcgaagcggccgac
tgccaatcctga
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