KEGG   Variovorax sp. 38R: IG196_29280
Entry
IG196_29280       CDS       T10235                                 
Symbol
tssE
Name
(GenBank) type VI secretion system baseplate subunit TssE
  KO
K11897  type VI secretion system protein ImpF
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vav02044]
    IG196_29280 (tssE)
Secretion system [BR:vav02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IG196_29280 (tssE)
SSDB
Motif
Pfam: GPW_gp25 SIR4_SID
Other DBs
NCBI-ProteinID: QOF78339
UniProt: A0A7L8SEJ0
LinkDB
Position
complement(6305091..6305582)
AA seq 163 aa
MTGFEPGLLDKLFDDDWRGPASPVLRHLSLDEVKNVVARDLESLLNTRMVFDDAKLEAYP
ECRRSVMTYGLSDFSGLSLASHYDRSFICRSLEQAIARHESRLRDVSVSLEVDGQASTHM
LYFGITALLVLPELAEPVNFDAMLQPTTLQYSITRGTGKSRYA
NT seq 492 nt   +upstreamnt  +downstreamnt
atgacaggattcgaaccgggcctgctcgacaagctgttcgatgacgactggcgcggtccg
gcttcgccggtgctgcgccatttgtcgcttgacgaggtcaagaacgtggtcgcacgcgac
ctcgagtccctgctcaacacgcgcatggtcttcgacgacgccaagctcgaggcctacccc
gagtgccggcgttccgtcatgacctacggcctgagcgatttctcgggcctgagtctggcc
agccactacgaccgttcgttcatctgccgctcgctggagcaggccattgcgcgccacgag
tcgcgcctgcgcgatgtctcggtgtcgctcgaggtcgacggccaggccagcacccacatg
ctttattttggaatcaccgccttgctcgtgctgcccgagctggccgagccggtgaacttc
gacgccatgctgcagcccacgacgctgcagtactccatcacccgcggcaccggcaagagc
cggtacgcctag

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