KEGG   Variovorax sp. 38R: IG196_29295
Entry
IG196_29295       CDS       T10235                                 
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
  KO
K11901  type VI secretion system protein ImpB
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vav02044]
    IG196_29295 (tssB)
Secretion system [BR:vav02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IG196_29295 (tssB)
SSDB
Motif
Pfam: T6SS_VipA CENPU
Other DBs
NCBI-ProteinID: QOF78342
LinkDB
Position
complement(6307782..6308297)
AA seq 171 aa
MATKRQSVQKRLQKVRPPRVQLTYDVELGDAIEKKELPFVVGVIADLAGQSEVEQPKLKD
RKFVSIDRDNMDDVMKGVAPRAAFQVPNKLDGRGGSFGVDLTFNSMDAFSPEAVVEQIEP
LKRLLDARTKLADLRNKMAGNSKLEDLLADVLNNTEQLQRLGQGVGKKDES
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcgaccaaaagacagagcgtgcagaagcgtctccaaaaagtgcgcccgccgcgcgtg
caactcacgtacgacgtggaactcggtgacgccatcgagaaaaaggaattgcctttcgtc
gtcggcgtgatcgccgatctggcgggccagtccgaggtggagcagcccaagctcaaggac
cgcaagttcgtcagcatcgaccgcgacaacatggacgacgtcatgaagggcgtggccccg
cgtgccgccttccaggtgccgaacaagctggacggccgcggcggcagcttcggcgtcgac
ctcaccttcaactcgatggacgccttctcgcccgaagccgtcgtcgagcagatcgagccg
ctcaagcgcctgctcgacgcgcgcaccaagctggccgacctgcgcaacaagatggccggc
aacagcaagctcgaagacctgctggccgacgtgctgaacaacaccgagcaactccagcgc
ctgggacaaggcgttggcaagaaggacgaaagctga

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