Variovorax sp. 38R: IG196_29555
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Entry
IG196_29555 CDS
T10235
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vav Variovorax sp. 38R
Pathway
vav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IG196_29555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_29555
Enzymes [BR:
vav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IG196_29555
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IG196_29555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QOF78383
UniProt:
A0A7L8SGA2
LinkDB
All DBs
Position
complement(6363605..6364441)
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AA seq
278 aa
AA seq
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MTDTAAVHTLRLDARQRAMLDEMGVKVWWPVPPEPEIEVEAEPEAPVAADSGMPDMPEGP
PLELDDRDQAYDAPPPPRPAPAPVARPVAAPAPRPVAAPPVAQGAAVLVEAPCRLYADKA
DATAPVQGGWLVVADMPPEADGRHGEPFAGDAGRLLDNMLRALKLHDGRTPVHLMRTHRG
VAAGQPGSPQPIDAAFDAHAAALAPCVVLAMGPLAAQSLMQSRDPLGKLRGRAVPLASAN
GVPVVATYHPAYLLRNPADKARAWADLCLAAEQATPTA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaccgccgctgtacacaccttgcgcctggacgcgcgccagcgcgccatgctc
gacgagatgggcgtgaaggtctggtggcccgtgccgccggagccagagatcgaagtcgaa
gccgagccggaggcccccgtggccgctgattcgggcatgcccgacatgcccgaaggcccg
ccgctggagcttgacgatcgcgaccaggcttacgacgcaccgcctccgccacgcccggcg
cccgcgcccgtcgcccgccccgtggccgccccggccccgcgtcccgtcgcggcaccgcct
gtggcgcaaggcgccgccgtgctggtcgaagcgccctgccgcctgtacgccgacaaggcc
gatgccacggcgccggtgcagggcggctggctggtcgtggccgacatgccgcccgaggcc
gacggccgccacggcgagcccttcgcgggtgacgccggccgcctgctcgacaacatgctg
cgcgcgctgaagctgcacgacggtcgcacgcccgtgcacctgatgcgcacgcaccgcggc
gtggccgccggccagcccggcagcccgcagccgatcgacgccgccttcgacgcccacgcg
gcagcattggcgccgtgtgtcgtgctggcgatgggcccgctggccgcgcagagcctgatg
caaagccgcgatccgctgggcaagctgcgcggtcgcgccgtgccgctggcgtcggcgaac
ggcgtgccggtggtcgccacgtaccaccccgcctacctgctgcgcaacccggccgacaag
gcccgcgcctgggccgacctgtgcctggcggcagagcaagccacccccacggcctga
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