Variovorax sp. 38R: IG196_29750
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Entry
IG196_29750 CDS
T10235
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
vav Variovorax sp. 38R
Pathway
vav03060
Protein export
vav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IG196_29750 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IG196_29750 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vav02044
]
IG196_29750 (secD)
Secretion system [BR:
vav02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IG196_29750 (secD)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
ACR_tran
Sec_GG
GP3
Motif
Other DBs
NCBI-ProteinID:
QOF78419
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Position
complement(6401984..6403867)
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AA seq
627 aa
AA seq
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MNRYPVWKYAIIVIVLLVGLIYALPNFFGEAPAVQVSAAKTSVKVDAATQTRVEEALKAA
GLTPDLVTLDAGSLRARFTTTDDQLKARDVVQRALVPDASDPPYTVALNLLSRSPKWLTS
LHAFPMYLGLDLRGGVDFLLQVDMKGAIDKKAESFASDLRTTFRDKNIRGTQVSRNGQTV
EVTFRDAASLETAKRLIVDQFPDLSTTDTQDGTNWRLTATIKPEAARRLQDAALKQNITT
LHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKEILGRTATLEMRMVDESSEGRAA
ELSGAPVPFGSEKFLDRSGRPVIVKKQVLVTGENLTDAQPGFDQQSNQPKVDLTMDAKGG
RIMRDVSRENYKKRMAMLIFEKGKGEVLTAPSINGELGNRFQVSGSMTVAEASDLALLLR
AGSLAAPMEIIQERTIGPTLGADNIEKGFKSVMYGFLAIMVFMCLYYALFGLFSSIALAV
NLMLLVAILSMLQATLTLPGIAAMALAIGVAIDSNVLINERVREELRNGASPQAAIHAGY
ERAWGTILDSNVTTLIAGIALLAFGSGPVRGFAVVHCIGIVTSMFSAVFFSRGLVNFWYG
QKKKLKSVSIGTVWRPKTDGSAVVETK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttacccggtctggaagtacgcgatcatcgtgatcgtgctactcgtggggctc
atctacgccctgcccaatttcttcggcgaagcacccgcggtgcaggtgtccgcggccaag
acgagcgtcaaggtcgatgccgccacccagacccgggtcgaggaggcgctgaaggcggcc
ggcctgacgcccgacctggtgacgctcgacgccggctcgctgcgcgcccgcttcaccacc
accgacgaccagctcaaggcgcgggacgtcgtgcagcgcgccctggtgcccgacgccagc
gacccgccctacacggtggcgctgaacctgctgtcgcgttcgccgaagtggctcacgtcg
ctgcatgcgttcccgatgtacctgggcctggacctgcgcggcggggtcgacttcctgctg
caggtcgacatgaagggcgccatcgacaagaaggccgagtcgttcgcgagcgacctgcgc
accaccttccgcgacaagaacatccgcggcacccaggtcagccgcaacggccagaccgtc
gaggtgaccttccgcgatgcagcctcgctcgagaccgccaagcgcctgatcgtggaccag
ttccccgacctcagcaccaccgacacgcaagacggcaccaactggcgcctgaccgccacc
atcaagcccgaggcggcccgccgcctgcaggacgccgcgctcaagcagaacatcacgacc
ctgcacaaccggatcaacgaactcggcgtggccgagccggtgatccagcagcagggcctg
gaccgcatcgtcgtgcagctcccgggcgtgcaggacacggccaaggccaaggaaatcctg
ggccgcaccgccacgctcgaaatgcgcatggtcgacgaaagctccgagggccgcgcggcc
gaactgagcggcgcgcccgtgcccttcggctccgagaaattcctcgaccgcagcggccgt
ccggtgatcgtgaagaagcaggtgctcgtcaccggcgagaacctcaccgacgcccagccc
ggcttcgaccagcagagcaaccagcccaaggtcgacctgaccatggacgccaagggcggc
cgcatcatgcgcgacgtcagccgcgagaactacaagaagcgcatggccatgctgatcttc
gagaagggcaagggcgaagtgctcacggccccgtcgatcaacggcgagctgggcaaccgc
ttccaggtctcgggctcgatgacggtggccgaggccagcgacctcgccctgctgctgcgc
gccggctcgctggccgcgcccatggagatcatccaggagcgcaccatcggcccgacgctt
ggcgccgacaacatcgaaaaaggcttcaagagcgtgatgtacggcttcctggccatcatg
gtcttcatgtgcctgtactacgcactgttcggcctgttctcgtcgatcgcgctggccgtc
aacctgatgctgctggtcgccatcctgtcgatgctgcaggccacgctcacgctgcccggc
atcgcggccatggcgctcgccatcggcgtggccatcgactccaacgtgctgatcaacgag
cgcgtgcgcgaagagctgcgcaacggcgcctcaccgcaggccgccatccacgcgggctac
gaacgcgcctggggcacgattctcgattcgaacgtgaccacgctcatcgcgggtatcgcg
ctgctggctttcggctcgggcccggtgcgcggctttgcggtggtgcactgcatcggcatc
gtcacctcgatgttctcggccgtgttcttctcgcgcggcctcgtgaacttctggtacggc
cagaagaagaagctcaagtctgtgtcgatcggcaccgtctggcggccaaagaccgacggc
agcgccgtggtcgaaaccaagtaa
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