Variovorax sp. 38R: IG196_30930
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Entry
IG196_30930 CDS
T10235
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_30930
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
GntR family
IG196_30930
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
UTRA
Rrf2
HTH_41
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QOF78643
LinkDB
All DBs
Position
complement(6655788..6656597)
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AA seq
269 aa
AA seq
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MNLPAASPLPSPLGGDHGAGVTQYLQLASVLRHRIAHGELQPGQQLPTVAQLAADYKLAR
VTVRQAYGVLAREGLLTSQRGRGTFVAARPAACADPLLRNAINDPRARNIRFDILEQRRQ
QPLPEGLARGSATFPDYAFIRKIHVHDDEPFCLVEIHVASEIHALFPPDSEQHHKIAHLL
EQHAAERMHKVQQTLTVAPADLLLAQYLHCSFATPIAHMERRVFDTQGRIALAGRFWYRG
DRFVSDIEMPFATWANAGASLIPEALALP
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcccgccgcgtcccctcttccttcgcccctgggtggcgaccacggcgcgggc
gtcacgcagtacctgcagttggccagcgtgctgcgccaccgcatcgcccacggcgaactg
cagcccggccagcaactgcccaccgtggcgcaactcgcggccgactacaagctcgcgcgc
gtcacagtgcggcaggcctacggcgtgctggcgcgcgaaggcctgctcaccagccagcgc
gggcgcggcaccttcgtcgcggcccggcccgccgcgtgcgcggacccgctgctgcgcaac
gccatcaacgatccgcgggcgcgcaacatccgcttcgacatcctcgagcagcgccgccag
cagccgctgcccgaaggcctggcacgcggcagcgccaccttcccggactacgccttcatc
cgcaagatccacgtgcacgacgacgagcccttctgcctcgtcgagatccatgtggcgtcg
gagatccacgcgctgtttccgcccgacagcgaacagcaccacaagatcgcccacctgctc
gaacagcatgccgccgagcgcatgcacaaggtgcagcagacgctcaccgtggcgccggcc
gacctgctgctcgcgcagtacctgcactgctccttcgccacccccatcgcgcacatggag
cgccgcgtcttcgacacccagggccgcatcgcgctcgccgggcgcttctggtaccggggc
gaccgcttcgtgtccgacatcgagatgcccttcgccacctgggccaacgccggggcgtcg
ctgatccccgaggccctggcgctgccctga
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