Variovorax sp. 38R: IG196_31050
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Entry
IG196_31050 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31050
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
QOF78666
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All DBs
Position
6676923..6678110
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AA seq
395 aa
AA seq
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MPPLFTRHRFLRHAVALSAALLATPLAAWAAPASGEPVWFGVSGPLTGQNAQYGAQWKAG
FDLAIDHINAQGGIHGRPLAYNFEDSQSDPRQSVAIAQKLVNDKRVLIELGDFSSPASMA
ASPIYQRAGLVQLGFTNSHPDFTKGGDYIWSPSISQADAQPLLADLAVKTLGFKRIAVLF
LNTDWGRTSKDVLVKAAQERGAQLAIAEGYQPDEKDFRSTLVRVRDANPDGLVLISYYPD
GALIAGQVRSVGLKQPIAAVGSVYSPKFIELGGAAVNGIHTNTAFYPDEPRAEVQEFVKS
FRAKYSKEPDAFNAYAYDAVVYAAAALRQAGPKADRKAVRDAFYKIKDVPSVIFGKATFD
AQTRRVIGVKSVNLVVKDGKWAQIDEKAAALASAK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctgttcacccgccatcgtttcctgcgccatgcggtcgcactgtccgccgcc
ttgctggccacgccgctcgcggcctgggccgcacccgccagcggcgagcccgtgtggttc
ggcgtgagcggtccgctcaccggacagaacgcgcagtacggcgcgcagtggaaggccggc
ttcgacctcgcgatcgatcacatcaacgcgcaaggcggcatccacggccgtccactcgcc
tacaacttcgaggacagccagagcgacccacgccagtccgtcgccattgcgcaaaaactc
gtgaacgacaagcgcgtgctcatcgagctgggcgacttctccagccccgcctcgatggcc
gcctcgcccatctaccagcgcgcgggcctcgtgcagctgggcttcaccaactcgcacccc
gacttcaccaagggcggcgactacatctggagcccgtcgatcagccaggccgacgcgcag
ccgctgctggccgacctcgccgtgaagacgctgggcttcaagcgcatcgcggtgctcttc
ctgaacaccgactggggccgcaccagcaaggacgtgctcgtgaaggccgcgcaggaacgc
ggcgcgcagctcgccattgccgagggctaccagcccgacgagaaagacttccgctcgacc
ctggtgcgcgtgcgcgatgccaaccccgacgggctggtgctgatctcgtactaccccgac
ggcgcgctcatcgcgggccaggtgcgcagcgtgggcctgaagcagccgatcgccgccgtg
ggctcggtctactcgcccaagttcatcgagctcggcggcgcggccgtgaacggcatccac
accaacaccgccttctatcccgacgagccgcgcgccgaagtgcaggagttcgtgaagagc
ttccgtgcgaagtacagcaaggagcccgacgccttcaacgcctatgcctacgacgccgtg
gtgtacgccgccgccgcgctgcgccaggccggcccgaaggccgaccgcaaggccgtgcgc
gatgcgttctacaagatcaaggacgtgcccagcgtcatcttcggcaaggccaccttcgat
gcgcagacgcgccgcgtgatcggcgtgaagagcgtcaacctggtggtgaaggacggcaag
tgggcgcagatcgacgagaaggcggcggcgctggcatcggccaagtag
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