Variovorax sp. 38R: IG196_31200
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Entry
IG196_31200 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31200
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31200
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31200
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF6644
DUF6971
CBM65_1
Motif
Other DBs
NCBI-ProteinID:
QOF78693
UniProt:
A0A7L8SHB4
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All DBs
Position
complement(6708019..6709227)
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AA seq
402 aa
AA seq
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MNTSRTALALALGALFASGAFAQVSDDTIRIGFISDMSGIYRDYDGPAGAEAIRMAIADM
GGAIDGKKIELVTADHQNKPDIAAAKAREWFDVTKVDMLIGGVNSGAAIAMAGVAADKKK
PYFVVGSGASSLTNEYCSPYTVHYAYDTVAMARGTASAVVKAGGKSWYFVAADYAFGAAL
QNDATKTVQASGGTVAGSVKHPLGASDFSSFMLQAQSSKAQVLALANAGGDTVNAIKSAA
EFGLSKNMKLAGMIITINDVHALGLKASQGMYLTDSWYWNQSPESRAWARRFFDKHKRMP
SSFHAGDYSATLQYLQAVKAAGSDDADKVMAQLRKTKFNDMFVKGGWLRDDGLMVHDMHL
MQVKTPAESKEPWDYYKVIENIPGEAAWTTKTESRCARWKQA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttcccgcaccgcactggccctcgcactcggcgcactctttgcatcgggcgcc
ttcgcccaggtgtccgacgacaccatccgcatcggcttcatcagcgacatgtcgggcatc
taccgcgactacgacggcccggccggcgccgaggcgatccgcatggccatcgccgacatg
ggcggcgccatcgacggcaagaagatcgagctggtcacggccgaccaccagaacaagccc
gacatcgccgccgccaaggcgcgcgaatggttcgacgtgaccaaggtcgacatgctgatc
ggcggtgtcaactcgggcgcggccattgccatggcgggcgtggcggccgacaagaagaag
ccgtacttcgtggtgggctcgggcgcgtcgagcctcaccaacgagtactgctcgccctac
accgtgcactacgcctacgacacggtggcgatggcgcgcggcaccgcgagcgcggtggtc
aaggccggcggcaagagctggtacttcgtggcggccgactacgccttcggtgccgcgctg
caaaacgacgccaccaagaccgtgcaggccagcggcggcacggtggcgggctcggtgaag
cacccgctgggcgcgagcgatttctcgtcgttcatgctgcaggcgcaaagctcgaaggcg
caggtgctggcgctggccaacgcgggcggcgacacggtgaacgccatcaagtcggcggcg
gagttcggcctcagcaagaacatgaaactcgccggcatgatcatcaccatcaacgacgtg
cacgcgctgggcctgaaggcctcgcagggcatgtacctcaccgacagctggtactggaac
cagagccccgagtcgcgcgcgtgggcgcgccgcttcttcgacaagcacaagcgcatgcct
tcttctttccatgccggcgactactcggccacgctgcagtacctgcaggccgtgaaggcc
gcgggcagcgacgacgccgacaaggtgatggcgcagctgcgcaagacgaagttcaacgac
atgttcgtcaagggcggctggctgcgcgacgacggcctcatggtgcacgacatgcacctc
atgcaggtgaagacaccggccgagtcgaaggagccatgggactattacaaggtgatcgag
aacatccccggcgaagccgcgtggaccaccaagacggagagccgctgcgcgcggtggaaa
caagcatga
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