Variovorax sp. 38R: IG196_31270
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Entry
IG196_31270 CDS
T10235
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31270
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QOF78707
LinkDB
All DBs
Position
complement(6722789..6723772)
Genome browser
AA seq
327 aa
AA seq
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MSPVVASAPSSPRRGAFVVPVLCAIALAVAGPLLGNYASDFIVKVMILSIFALSLELLVG
MTGLVSLGHAAFYGIGAYVTVLASGSEGGNFAVLLVLSMGAAALYALFVGALSLRTRGVY
FIMVTLAFAQMAFFVFHDTKVGGGSDGIYLYVRPALGALDMENRSVLFYVVLASLVFTYG
LLALVRRSRFGAALAGIRVNEQRMRAAGFPVYGYKLAAFVLAGALAGLAGFLLASRDGVV
NPELMAWHNSGEVLLMVILGGLGHLRGAVIGAVAFTLLKEIFSTHAVMGPLADHWQLTLG
IAIIVFVALLPKGLIGLVQRLSPKGGA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgtggttgcatccgcaccttcgtcgccccggcgcggcgccttcgtcgtgccc
gtgctgtgcgccatcgccctcgccgtggccggtccgctgctgggcaactacgcgtcggac
ttcatcgtcaaggtgatgatcctgtcgatcttcgcgctcagcctggagctgctggtgggc
atgaccgggctcgtgagcctgggccatgcggccttctacggcatcggcgcgtacgtcacc
gtgctggcctcgggcagcgagggcggcaacttcgcggtgctgctggtgctgtcgatgggc
gcggcggcgctgtatgcgctgttcgtcggtgcgctgagcctgcgcacgcgcggcgtgtac
ttcatcatggtcacgctggccttcgcgcagatggccttcttcgtgttccacgacaccaag
gtcggcggcggcagcgacggcatctacctgtacgtgcgccccgccctcggcgcgctcgac
atggaaaaccgcagcgtgctgttctacgtggtgctggcctcgctggtgttcacctacggc
ctgctcgcgctggtgcgccgctcgcgcttcggcgcggcgctcgcgggcatccgcgtgaac
gagcagcgcatgcgcgccgcgggctttccggtgtacggctacaagctcgcggccttcgtg
ctcgcgggcgcgctggccggacttgcaggctttctgctggcctcgcgcgatggcgtggtc
aaccccgagctgatggcctggcacaactcgggcgaggtgctgctgatggtgatcctcggc
ggcctcggccacctgcgcggcgcggtgatcggtgcggtcgcattcacgctgctgaaggaa
atcttctcgacgcatgcggtgatggggccgctggccgatcactggcagctcacgctgggc
attgcgatcatcgtgttcgtggcgctgctgcccaagggcctgatcgggctcgtgcagcgc
ctgtcgccgaagggaggcgcatga
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