Variovorax sp. 38R: IG196_31280
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Entry
IG196_31280 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31280
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31280
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
Motif
Other DBs
NCBI-ProteinID:
QOF78709
LinkDB
All DBs
Position
complement(6724754..6725929)
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AA seq
391 aa
AA seq
DB search
MTNLRTARLALTAIAFAALATAAGAQGTAKLKVGLMLPYSGTYTALGVAIENGFKLYVEQ
QGGKLAGREIEYFKVDDESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAKESG
TVLIVPNAGADAVTGPMCAPNIFRSSFSNWQPAFAMGEVAAKQQGKKKVMTITWKYAAGE
ESVNGFKEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGGGAVKFVKD
YQAAGLNKTIPLYGPGFLTDGTLDAQGESAQGMLTTLHYADGLNTPRDNAFRVAYAKSFK
LQPDVYAVQGYDAAQMLGVGLNATKGDISKKAEFTGAIEKAKIDSPRGTFTMSKSHNPVQ
DIYLRKVDGKENKLVSTAIKGLSDPARGCRM
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccttcgcaccgcgcgcctggcgctcacggccatcgccttcgccgcactggcc
accgccgccggcgcgcaaggcacggcaaagctcaaggtcggcctgatgctgccctacagc
ggcacctacaccgccctgggcgtggccattgaaaacggcttcaagctctacgtggaacag
cagggcggcaagctcgcgggccgcgagatcgaatacttcaaggtcgacgacgagtccgac
cccgccaaggccaccgacaacgtcaacaagctcatcaagcgcgacaacgtcgacgtgatc
gtcggcaccgtgcactcgggcgtggccatggccatggccaaggccgccaaggaaagcggc
accgtgctcatcgtgccgaacgccggcgccgacgcggtcacgggccccatgtgcgcaccc
aacatcttccgcagctcgttcagcaactggcagccggctttcgccatgggcgaagtggcg
gccaagcagcagggcaagaagaaggtcatgaccatcacctggaagtacgcggccggcgaa
gagtcggtcaacggcttcaaggaaggcttcgagaagaacggcggcaaggtcgacaagcag
ctcacgctgcccttccccaacgtggagttccaggcgctgctgaccgagatcgcggcggcc
aagcccgatgcggtgtacgccttcttcgcgggcggcggcgcggtgaagttcgtcaaggac
taccaggccgccggcctgaacaagaccatcccgctgtacggccccggcttcctgaccgac
ggcacgctcgacgcgcagggcgaatcggcgcaaggcatgctcaccacgctgcactacgcc
gacggcctgaacaccccgcgcgacaacgccttccgcgtggcctatgccaagtcgttcaag
ctgcagcccgacgtgtacgcggtgcagggctacgacgccgcgcaaatgctgggcgtgggc
ctgaacgccaccaagggcgacatctcgaagaaggccgagttcacgggcgcgatcgagaag
gccaagatcgacagcccgcgtggcaccttcacgatgagcaagtcgcacaacccggtgcag
gacatctacctgcgcaaggtcgatggcaaggaaaacaagctcgtcagcacagctatcaag
ggcctgtctgatcctgctcgcggctgccggatgtaa
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