Variovorax sp. 38R: IG196_31500
Help
Entry
IG196_31500 CDS
T10235
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31500
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31500
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_5
Peripla_BP_6
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
QOF78750
LinkDB
All DBs
Position
complement(6769046..6770200)
Genome browser
AA seq
384 aa
AA seq
DB search
MADRDPLRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVDGRELVGVRYDPQSNPV
RYAQLAEKLIVQDRVNVIFGCYMSSSRKAVIPVIEKWNKLLFYPTLYEGFEYSGNVIYTG
AAPNQNSVQLAEFMTTNFGSRVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERYVALD
ATEKDYRAIMDDIRDKRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPISSLTTSEAEIS
QMGPGVATGHFTAAPYFQSIDSPANQRCLARLRARFGDGCVPNLCWEASYFQMHIFANAF
RQAGTDGIAEILPHILGSEFDAPQGRVKIDPTNHHTCLYPRIGRVDAHGQFTIVRQATRA
VYPDPYLVTHSLGDWTARLDTLEL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacagggaccctcttcgcgtcggcattctgtattccgagaccggcgtcacctcg
accatcggcctgtcgcagctgcagggcgcgctgctggccatcgaggaaatcaacgcggcc
ggcggcgtcgatggccgcgagctcgtgggcgtgcgctacgacccgcaatcgaaccccgtg
cgctacgcccagctggccgaaaagctcatcgtgcaggaccgcgtgaacgtgatcttcggc
tgctacatgtcgagcagccgcaaggccgtgatcccggtgatcgaaaagtggaacaagctg
ctgttctaccccacgctgtacgaaggcttcgagtactcgggcaacgtgatctacaccggc
gcggcgcccaaccagaacagcgtgcagctggccgagttcatgaccacgaacttcggctcg
cgcgtgtacctgatcggctccgactacatctacccttacgagtcgaaccgcatcatgggc
gagctggtgatgcagcggcccggcagcgaaaaactcggcgagcgctacgtggcactcgac
gccaccgaaaaagactaccgcgcgatcatggacgacatccgcgacaagcggcccgacttc
atcttctcgacggtggtgggtgattcgacggccagcctgtaccgcgcgtatgccgaagcg
ggcttcgatccgaagacgatgcccatctcgagcctcacgacgtcggaggccgagatctcg
cagatgggccctggcgtggccacgggccacttcacggcggcgccgtatttccagtcgatc
gactcgcccgccaaccagcgctgcctggcaaggctgcgcgcgcgcttcggcgacggctgc
gtgcccaacctgtgctgggaagcgtcgtacttccagatgcacatcttcgccaacgccttc
cggcaggcgggcaccgacggcatcgcggagatcctgccgcacatcctgggcagcgagttc
gatgcgccgcagggccgcgtgaagatcgacccgacgaaccaccacacctgcctgtacccg
cgcatcggccgcgtcgatgcgcacgggcagttcaccatcgtccggcaggcgacgcgcgcg
gtgtacccggacccttacctcgtcacccactcgctgggcgactggacggcacggctcgac
acgctggagctctag
DBGET
integrated database retrieval system
