Variovorax sp. 38R: IG196_31645
Help
Entry
IG196_31645 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31645
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31645
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
QOF82142
LinkDB
All DBs
Position
complement(6799618..6800763)
Genome browser
AA seq
381 aa
AA seq
DB search
MAGAAQAQTTEPLRIGLIATYSGPYADYGRQFDAGIALYLKEHGGKVGGRTVEIIKKDTA
GPAPDAAKRIAQELVVRDKVSILTGLDFSPNAYAVGAIATQAKIPTLVMNAASSAITTSS
PYVARLSFTVQQVTDPMARYMLKQGVKDAYTVVADYASGVDAETAFKKAFTAGGGKVSGE
VRTPMNNPDFSAYVQRIKDAKPQAVFFFFPSGVMPPAFLKVWKERGMEQAGIKLFATGEA
TDDSYLDATGDVALGLVTSHHYSFAHNSPKNQKFVKDFAADNGTKLRPSYFAVTAYDTMA
AIDLALAKTKGDTGGDKFMDALKGLSFESPRGPIEIDAVTRDIVQTVYIRKTERANGQLV
NVEFDKFERVKDPAKEAAAAK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgctgcgcaagcccagaccaccgagccgctgcgcatcggcctcatcgcgacc
tactccggcccctacgccgactacggccgccagttcgacgccggcatcgcgctctatctg
aaggagcacggcggcaaggtgggcggacgcaccgtcgaaatcatcaagaaggacaccgcc
ggccccgcacccgacgccgccaagcgcatcgcgcaggaactcgtcgtgcgcgacaaggtg
agcatcctcaccggcctggacttcagccccaacgcctacgccgtgggcgccatcgccacg
caggccaagatccccacgctggtgatgaacgccgcctcctcggccatcaccaccagctcg
ccctacgtggcgcgcctgtcgttcaccgtgcagcaggtcaccgacccgatggcgcgctac
atgctcaagcagggcgtgaaggacgcctacaccgtggtcgccgactacgcctcgggcgtc
gatgccgagaccgcgttcaagaaggccttcaccgccggcggcggcaaggtctcgggcgag
gtgcgcacgccgatgaacaaccccgacttctcggcctacgtgcagcgcatcaaggacgcc
aagccccaggccgtgttcttcttcttcccctcgggcgtgatgccgccggccttcctcaag
gtgtggaaggagcgcggcatggagcaggccggcatcaagctcttcgccaccggcgaagcc
accgacgacagctacctggacgccaccggcgacgtggcgctgggcctcgttaccagccac
cactactcgttcgcgcacaactcgccgaagaaccagaagttcgtcaaagacttcgccgcc
gacaacggcaccaagctgcgccccagctacttcgccgtgaccgcctacgacaccatggcc
gccatcgacctcgcactggccaagaccaagggcgacaccggcggcgacaagttcatggac
gcgctcaagggcctgagcttcgagagcccgcgcggcccgatcgagatcgacgcggtcacg
cgcgacatcgtgcagaccgtctacatccgcaagaccgagcgcgccaacggccagctggtg
aacgtggagttcgacaagttcgagcgcgtcaaggacccggccaaggaagccgccgccgcc
aagtaa
DBGET
integrated database retrieval system
