Variovorax sp. 38R: IG196_31930
Help
Entry
IG196_31930 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31930
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31930
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Tor_FN3_1st
Motif
Other DBs
NCBI-ProteinID:
QOF78825
LinkDB
All DBs
Position
6863410..6864615
Genome browser
AA seq
401 aa
AA seq
DB search
MNPLRHVFCAASVVTLASALVPAHAQGVIKIGEINSYKAQPAFLEPYKKGMELAVDEINA
KGGVNGKKLELISRDDNANPGDAVRVAEELISREKVDVLAGAFLSNTGLALTDFAKQKKF
FYLAAEPLTDKIVWSNGNKYTYRLRPSTYMQVAMLVPEAAKLKKKRWAIVYPNYEYGQSS
VATFKTLLKAVQPDVEFVAEQAPPLGKVDAGSVAQALADAKPDAIFNVLFGADLSKFVRE
GNTRGLFKDREVVSVLTGEPEYLDPLKDEAPNGWIVTGYPWYGIKTAEHKAFNDAYQAKF
KDYPRLGSVVGYSAIYSIAAGLKKAGSTDTEKLVAAFKGLQVDTPFGKISYRAQDNQSTM
GAYVGKTKNDGGKGVMVDYVYLDGAKFQPTDDEVKKMRPAD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattgcgccatgtcttctgcgccgcttccgtcgtcacgctggcttcggccctg
gtccccgcgcatgcgcagggcgtgatcaagatcggtgaaatcaacagctacaaggcgcag
cccgccttcctcgagccctacaagaagggcatggaactcgcggtcgacgagatcaacgcc
aagggcggcgtcaacggcaagaagctcgagctcatcagccgcgacgacaacgccaacccc
ggcgatgccgtgcgcgtggccgaagaactcatctcgcgcgagaaggtcgacgtgctggcc
ggcgcgttcctgtcgaacacgggcctggcgctcaccgacttcgccaagcagaagaaattc
ttctacctcgccgccgagccgctgaccgacaagatcgtctggagcaacggcaacaagtac
acctaccgcctgcgcccctcgacctacatgcaggtcgcgatgctggtgcccgaggcggcc
aagctcaagaagaagcgctgggccatcgtgtaccccaactacgagtacggccagtcgtcg
gtcgccaccttcaagaccttgctgaaggccgtgcagcccgacgtcgagttcgtcgccgag
caggcgccgccgctgggcaaggtcgatgcgggcagcgtggcgcaggccctggccgatgcc
aagcccgacgccatcttcaacgtgctgttcggcgccgacctctccaagttcgtgcgcgaa
ggcaacacgcgcggcctctttaaggaccgtgaagtcgtgagcgtgctgaccggcgagccc
gagtacctcgacccgctgaaggacgaggcccccaacggctggatcgtcaccggctacccc
tggtacggcatcaagaccgccgagcacaaggccttcaacgacgcctaccaggccaagttc
aaggactacccgcgcctgggctcggtggtgggctacagcgccatctactcgatcgcggcc
ggcctgaagaaggccggcagcaccgacaccgagaagctggtcgcggccttcaagggcctg
caggtcgacacgcccttcggcaagatcagctaccgcgcgcaggacaaccagtccaccatg
ggcgcgtacgtcggcaagaccaagaacgacggcggcaagggcgtgatggtcgactacgtg
tacctcgacggtgccaagttccagccgacggacgacgaagtgaagaagatgcgccccgcg
gactga
DBGET
integrated database retrieval system
