Variovorax sp. 38R: IG196_31935
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Entry
IG196_31935 CDS
T10235
Name
(GenBank) ABC transporter permease
KO
K01997
branched-chain amino acid transport system permease protein
K01998
branched-chain amino acid transport system permease protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_31935
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_31935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_31935
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_31935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QOF78826
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Position
6864696..6866624
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AA seq
642 aa
AA seq
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MSFSGFVVQLLNGLAGASSLFLVAAGLSLIFGVTRIVNFAHGSFFMVGIYTAYTLVEKLG
PSVGFWPALLIAALAVGVLGALIEVLLLRRIYKAPELFQLLATFALVLVIKDAVLWLWGP
DELLGPRAPGLKGSVEILGRQFPSYDLFLIVVGPLVLGLVWLLLTRTRFGTLVRAATQDR
EMVSALGVNQAWLFTAVFALGALLAGLGGALQLPREPATLEMDLNTIGAAFVVVVVGGMG
SLPGAYVAALLIAEIKAVCIWLGVVQIFGIDVSFSKLTLMVDFLVMAIVLVWRPWGLFGR
PQAPSRYVGMQEEPLRPPSTAYIVAAAGLALVLAALPLLTAGSPYTTVLMIDLLIAALFA
TSLHFIMGPAGMHSFGHAAYFGLGAYGAALLVRTLHLPMELALVVAPLVAALGAFVYGWF
AVRLSGVYLAMLTLAFAQITWAITYQWDSFTGGSNGLTGVWPSEWLSNKQVYYWLTLVLV
GAGVWWLRRVLFSPFGYALRAGRDSVLRADAIGIDVKRMQWAAFVIAGTVAGLAGALYAF
SKGSISPESLSVGKSVDGLVMVLLGGIQTLAGPVVGAVTFTWLHDTVARNTDYWRAMLGA
IILILVLLFPQGIAGSIKQLVDRWRAPKHETDADAKLKEVKA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcaggcttcgttgttcagttgctcaacgggttggccggcgcgtcttcgctg
ttcctcgtggcggccggcttgtcgttgatcttcggcgtgacgcgcatcgtcaacttcgcc
catgggtcgtttttcatggtgggcatctacaccgcgtacacgctggtcgagaagctcggc
ccgagcgtgggcttctggcctgcgttgctgatcgccgcgctcgcggtgggcgtgctgggt
gcgctcatcgaggtgctgctcttgcgccgcatctacaaggcgcccgagctgttccagctg
ctggccaccttcgcgctcgtactcgtcatcaaggacgcggtgctgtggctctgggggcct
gacgaactgctcggcccgcgcgcgccgggcctcaagggctcggtcgaaatcctcggccgc
cagtttccttcctacgacctgttcctgatcgtcgtcggtccgctcgtgctcggcctcgtc
tggctgctgctcacgcgcacgcgcttcggcacgctggtgcgcgccgccacgcaagaccgc
gagatggtcagcgcgctcggcgtcaaccaggcctggctgttcaccgccgtgttcgcgctc
ggcgcattgctcgccggcctgggcggcgcactgcaactgccgcgcgaacccgccacgctc
gagatggacctgaacaccatcggcgccgccttcgtcgtcgtggtggtcggcggcatgggc
tcgctgcccggcgcctacgtggccgcgctgctcatcgccgagatcaaggccgtatgcatc
tggctgggcgtggtgcagatcttcggcatcgacgtgtcgttctccaagctcacgctgatg
gtcgacttcctcgtgatggcgatcgtgctggtgtggcgcccgtggggcctgttcggccgg
ccgcaggcgccgagccgctacgtcggcatgcaggaagaaccgctgcgcccgccgagcacc
gcctacatcgtggccgccgccgggctcgcgctggtgctcgccgcgctgccgctgctgacg
gccggctcgccctacaccacggtgctgatgatcgacctgctgatcgccgcgctgttcgcc
accagcctgcacttcatcatggggccggccggcatgcactccttcgggcacgccgcgtac
ttcggcctcggggcctacggcgcggcgctgctggtgcgcacgctgcatctgccgatggaa
ttggccctcgtggtcgcgccgctggtggccgcgctcggtgcctttgtctacggctggttt
gcggtgcgcctgtcgggcgtgtacctcgcgatgctcacgctggcctttgcgcagatcacc
tgggccatcacctaccagtgggacagcttcacgggcggcagcaacggcttgaccggcgtg
tggccgtcggagtggctgtcgaacaagcaggtgtactactggctcacgctggtgctcgtg
ggcgcgggcgtgtggtggctgcgccgcgtgctgttctcgcccttcggctatgcgctgcgc
gcgggccgcgactcggtgctgcgcgccgacgccatcggcattgacgtcaagcgcatgcag
tgggcagccttcgtcatcgccggcaccgtggcgggcctggccggcgcgctctatgcgttc
tcgaagggcagcatctcgcccgagagcctgtcggtcggcaagtcggtcgacggcctcgtg
atggtgctgctgggtggcatccagaccttggcggggccggtggtcggcgccgtcaccttc
acctggctgcatgacaccgtggcgcgcaacaccgactactggcgcgccatgctcggcgcc
atcatcctgatcctggtgctgctgttcccgcagggcattgccgggtcgatcaagcaactc
gtcgatcgctggcgtgcaccgaagcatgaaacagacgcagatgccaagctcaaggaggtg
aaagcatga
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