Variovorax sp. W6: SFB74_01170
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Entry
SFB74_01170 CDS
T11181
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vaw Variovorax sp. W6
Pathway
vaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFB74_01170 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaw03019
]
SFB74_01170 (recQ)
03400 DNA repair and recombination proteins [BR:
vaw03400
]
SFB74_01170 (recQ)
Enzymes [BR:
vaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFB74_01170 (recQ)
Messenger RNA biogenesis [BR:
vaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SFB74_01170 (recQ)
DNA repair and recombination proteins [BR:
vaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SFB74_01170 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
XVK59157
LinkDB
All DBs
Position
complement(266200..268092)
Genome browser
AA seq
630 aa
AA seq
DB search
MSSLAPQPIDISGSSAPSDILHEVFGYAQFRGAQQDIVDHVVGGGDALVLMPTGGGKSLC
YQIPAIARQRAGRGVAIVVSPLIALMHDQVGALHEAGVSAAFLNSTLDWEETQDVERRML
RGEITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEAHCVSQWGHDFRPEYRALTVL
HERYAGVPRIALTATADALTRADIVERLQLEDARQFVSSFDRPNIRYTIVEKKDATTQLL
RFIEREHEGDAGVVYCQSRKRVEDVAVQLRDAGINALPYHAGLDAAVRQQHQDRFLREEG
IVMVATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQETGRAGRDGGPADAWMAYGLQDVVN
QRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLLGYFGEKSTPCGNCDNCLNPP
QVWDGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGKSTEKVKQFGHERISTFGIGAE
FSEVALRGVLRQLIATGALAVDAEAFNTLKLTEGSRSVLRGETQVTLRESVSSPAERKPR
REKTAKGAPPPAAAKLDDMGRKRFDALKAWRAEVAKEHNLPAYVIFHDATLAAIAERAPA
TLEDLQGISGIGTKKLEAYGSEVLRVCEAF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttccctcgccccccaacccatcgacatctccggcagcagcgccccttccgacatc
ctccacgaggtcttcggctacgcgcagttccggggggcccagcaagacatcgtcgatcac
gtggtgggcggcggcgacgcgctggtgctgatgcccacgggcggcggcaagtcgctgtgc
taccagatcccggccatcgcccggcagcgcgcggggcgcggcgtggcgatcgtggtgtcg
ccgctcatcgcgctgatgcacgaccaggtgggcgcgctgcacgaggccggcgtgagcgcg
gccttcctcaattccacgctcgactgggaagagacgcaggacgtggagcgccgcatgctg
cgcggcgagatcaccctgctgtacgcggcgcccgagcgcgtgaacacgccgcgctttctc
tcgcagctcgattcgctgaaggagcgcggcaagctctcgctcttcgccatcgacgaggcg
cattgcgtgagccagtggggccacgacttccgccccgagtaccgcgccctcaccgtgctg
cacgagcgctacgccggcgtgccgcgcatcgcgctcacggccacggccgacgcgctcacg
cgcgccgacatcgtcgagcggctgcagctggaagacgcgcggcagttcgtctccagcttc
gaccggccgaacatccgttacaccatcgtcgagaagaaggacgccaccacgcagctgctg
cgcttcatcgagcgcgagcacgagggcgacgccggcgtggtctattgccagtcgcgcaag
cgggtggaagacgtggcggtgcagctgcgcgacgcgggcatcaacgccctgccttatcac
gcgggcctcgacgccgcggtgcgccagcagcaccaggaccgcttcctgcgcgaggaaggc
atcgtgatggtcgcgaccatcgccttcggcatgggcatcgacaagcccgacgtgcgcttc
gtcggccacctcgacatgcccaagaacatcgagggctactaccaggaaaccggccgcgcc
ggccgcgacggcggccccgccgacgcctggatggcctacggcctgcaggacgtggtcaac
cagcggcgcatgatcgacgagagccccgccggcgaagaattcaagcaggtgatgcgcggc
aagctcgacgccctgctctcgctggccgaggccagcgactgccggcgcgtgcgcctcctg
ggctacttcggcgagaagagcacgccctgcggcaactgcgacaactgcctgaacccgccg
caggtgtgggacggcaccgatgccgcgcgcaagctgctgagcaccatctaccgcgtgcag
caactgagcggcatcagcttcggcgccgggcacatcatggacatcctgcgcggcaagagc
accgagaaggtcaaacagttcggccacgaacgcatcagcaccttcggcatcggcgccgag
ttcagcgaggtggcgctgcgcggcgtgctgcgccagctgatcgccaccggcgcgctggcg
gtggacgcggaagccttcaacacgctgaagctcaccgaaggctcgcgctcggtgctcagg
ggcgagacgcaggtgacgctgcgcgaatcggtgtcgtcaccggcggagcgcaagccccgg
cgcgagaaaaccgccaagggcgcgccgccgccggccgcggccaagctcgacgacatgggc
aggaagcgcttcgacgcgctgaaagcctggcgcgccgaggtcgcgaaggaacacaacctg
ccggcctacgtgatcttccacgacgccacgctcgcggccatcgccgagcgcgcgcccgcg
acgctggaagacctgcagggcatcagcggcatcggcaccaagaagctcgaggcctacggc
agcgaggtgctgcgcgtctgcgaggcgttctga
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