KEGG   Variovorax sp. W6: SFB74_01395
Entry
SFB74_01395       CDS       T11181                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
vaw  Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:vaw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaw02044]
    SFB74_01395 (tssC)
Secretion system [BR:vaw02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SFB74_01395 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 Ste5_C
Other DBs
NCBI-ProteinID: XVK59202
LinkDB
Position
316882..318390
AA seq 502 aa
MSTAPKQTTARAPASVETLEPNEFSNLLQREFKPKTDQAREAVENAVKTLAVQALENTVT
ISNDAYRSVQAIITEIDRKLSEQINQILHHEDFQQLEGAWRGLHYLVNNTETDEQLKIRV
MCASKREVARSLKRHKGIGWDQSPLFKKIYEAEYGQFGGEPFGALIGDFHFDHSPPDVEM
LGEMAKIAAAAHCPFIAGASPTVMQMDSWQELSNPRDLTKIFQNTEHTAWRSLRDSEDAR
YIGLAMPRFLARLPYGARTNPVDEFEFEEETDSAAHNRYTWANSAYAMGVNINRSFKQYG
WCTSIRGVESGGAVENLPTHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKN
SDFAAFIGAQSLQLPAEYYDADATANANLAARLPYLFACCRFAHYLKCIVRDKIGSFRER
EDMERWLNDWIMNYVDGSPGTSSQDTKAMKPLAAAEVQVEAIEDNPGYYAAKFFLRPHYQ
LEGLTVSLRLVSKLPSNKKDSS
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgagcaccgcccccaaacagaccaccgcgcgcgcaccggcctccgtggaaacgctggag
ccgaacgagttctcgaacctgctgcagcgcgagttcaagcccaagaccgaccaggcccgc
gaggccgtggaaaacgccgtcaagacgctggccgtgcaggcgctggagaacacggtcacc
atctccaacgatgcctaccgctcggtgcaggccatcattaccgagatcgaccgcaagctc
tccgagcagatcaaccagatcctgcatcacgaggacttccagcagctcgaaggcgcatgg
cgcggcctgcactatctggtgaacaacaccgagaccgacgagcagctcaagatccgcgtg
atgtgcgcctccaagcgcgaagtcgcgcgctcgctcaagcgccacaagggcatcggctgg
gaccagagcccgctgttcaagaagatctatgaagccgagtacggccagttcggcggcgag
cccttcggcgcgctgatcggcgacttccacttcgaccacagcccgcccgacgtcgagatg
ctcggcgaaatggccaagatcgccgcggccgcgcactgccccttcatcgcgggcgcatcg
cccacggtgatgcagatggactcgtggcaggaactgtcgaacccgcgcgacctgaccaag
atcttccagaacaccgagcacaccgcatggcgctcgctgcgcgactcggaagacgcgcgc
tacatcggcctggccatgccgcgcttcctggctcgcctgccgtacggtgcccgcacgaat
ccggtcgacgaattcgagttcgaggaagagaccgattcggccgcgcacaaccgctacacc
tgggccaactcggcctatgcgatgggcgtgaacatcaaccgctcgttcaagcagtacggc
tggtgcacctccatccgcggcgtcgaatcgggcggcgcggtcgagaacctgcccacgcac
accttcccgaccgacgatggcggcgtggacatgaagtgcccgaccgaaatcgccatcagc
gaccgccgcgaggccgagctcgccaagaacggcttcatgccgctggtgcaccgcaagaac
tccgacttcgcggccttcatcggcgcgcagtcgctgcagctgccggccgagtactacgac
gccgacgccacggccaacgcgaacctcgcggcgcgcctgccgtacctgttcgcatgctgc
cgcttcgcgcactacctgaagtgcatcgtccgcgacaagatcggctcgttccgcgagcgc
gaggacatggagcgctggctcaacgactggatcatgaactacgtcgacggcagcccaggc
acctcgtcgcaggacacgaaggcaatgaagccgctggcggcagcggaagtccaggtggaa
gccatcgaggacaaccccggctactacgccgccaagttttttctccggccgcactatcag
ctcgaagggctgacggtgtcgttgcggctggtttcgaagctgccatccaacaagaaggac
agcagctaa

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