KEGG   Variovorax sp. W6: SFB74_01425
Entry
SFB74_01425       CDS       T11181                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vaw  Variovorax sp. W6
Pathway
vaw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SFB74_01425 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaw02044]
    SFB74_01425 (tssH)
Secretion system [BR:vaw02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SFB74_01425 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small Clp_N AAA_16 AAA_22 Sigma54_activat NBD_SMAX1 AAA_7 AAA_18 AAA_25 ATPase_2 nSTAND3 NACHT nSTAND6 Zeta_toxin AAA_14 T2SSE Rad17 AAA_24 AAA_30 AAA_33 TsaE DUF815 Hpr_kinase_C MT
Other DBs
NCBI-ProteinID: XVK59207
LinkDB
Position
323687..326425
AA seq 912 aa
MTDIRRVSLFSKLNPMLYKALETATAFAKLRGNAYVELVHWLHQILQQQDSDMLRIIKRA
GLNLDAVEQDLVRALDRLPHGATSISDISEHVDNAVERAWVYASLRFEATSIRGAYLLAG
IIKTPGLRQVLSGISREFDKIVPDVLVAQLASWTEGSPEDDFDAAPAGAAAGAPAAAHHQ
GDGPAAGGSALAKYASDLTAKARAGELDPVYGRDDEIRQIIDILMRRRQNNPLLTGEAGV
GKTAVVEGLASRLASGDVPPSLKDVSLWVLDPTLLQAGAGVKGEFEQRLRQVIDEVEKSP
KPIVLFVDEVHTLVGAGGQAGTGDAANLLKPALARGRLRTIGATTWSEYKKYIEKDPALT
RRFQTIQVHEPTEPKAVLMLRGISAELEKHHGVLILDAALEAAVSLSHRYIPARQLPDKA
VSLLDTACARVALSQHALPAAIEDLQRRIEVLGIESGIAGREAAIGVGEHQRVEDIAAQV
AQAKVELEVLEKRRVEESALVERIVALRKQLSPAAVPQTQAEASDADDVEAANVDVDPDT
PPVEPQRTPDEIRAELNEAQDKLSQLQGESPLILAAVDAQAVATVVADWTGIPIGRMVRD
DAQSVLKLGEILSARVVAQPDALETISRRIRTARARLDNPNKPVGVFLLCGPSGVGKTET
ALALSEALYGGEQNLVTINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVV
LLDEIEKAHTDVHEIFFQVFDKGWMEDGEGRHIDFRNTVIIMTSNVGTDLVMQLCEDPTL
RPDPEPLAAALREPLLKVFAPALLGRLVVVPYYPLHAEALHRIIRLQLDRIATRLQANHG
IALAYDDSAVELVARRCTAIESGGRMIDAILTHTILPRLSEEVIGATVSARKLSGVQLSA
AGDDFRYEFSEA
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgaccgacattcgccgcgtctctctgttctccaagctcaatccgatgctctacaaggca
ttggagaccgccaccgccttcgccaagctgcgcggcaacgcctacgtcgagctggtgcac
tggctgcaccagatcctgcagcagcaggacagcgacatgctgcgcatcatcaagcgcgcg
gggctcaacctcgatgcggtcgagcaagacctcgtgcgtgcgctcgaccggctgccgcac
ggcgccacctcgatcagcgacatctccgagcacgtcgacaacgccgtcgagcgcgcatgg
gtctatgcaagcctgcgcttcgaggccacctcgatccgcggcgcctatctgctcgcgggc
atcatcaagacgccagggctgcggcaggtgctctcgggcatctcgcgcgagttcgacaag
atcgtgcccgacgtgctggtggcgcagctggcctcttggaccgaaggctcgcccgaggac
gacttcgacgcagctccagccggcgctgccgccggagcaccagccgcggcgcatcaccag
ggcgacggccccgccgcgggcggctccgcgctcgccaagtacgcgagcgacctcaccgcc
aaggcgcgcgccggcgaactcgacccggtctatggccgcgacgacgagatccgccagatc
atcgacatcctgatgcgccgccgccagaacaacccgctgctgaccggcgaggccggcgtc
ggcaagacggcggtggtcgaaggccttgcctcgcgccttgcgtcaggcgacgtgccgcct
tcgctgaaggacgtgtcgctgtgggtgctcgaccccacgctgctgcaggccggcgctggc
gtgaagggcgaattcgaacagcggctgcgccaggtgatcgacgaagtcgagaagagcccc
aagcccatcgtgcttttcgtcgacgaagtgcatacgctggtgggcgcgggcggccaggcc
ggtaccggcgacgcggccaacctgctcaagccggcgctcgcgcgcgggcggctgcgcacc
atcggcgcgaccacctggtcggagtacaagaagtacatcgagaaggatccggcgctcacg
cggcgcttccagaccatccaggtgcacgagcccaccgagcccaaggcggtgctgatgctg
cgcggcatctcggcggagctcgagaagcaccatggcgtgctcatcctcgacgctgcgctc
gaagcggccgtgagcctgtcgcaccgctacattcccgcgcgccaactgcccgacaaggcc
gtgagcctgctcgacacggcatgcgcgcgcgtcgcgctgagccagcatgcgctgccagcc
gccatcgaagacctgcagcgccgaatcgaggtgctgggcatcgagtcgggcatcgcggga
cgcgaggctgccatcggcgtgggcgaacaccagcgcgtggaagacatcgcggcgcaggtc
gcgcaggcgaaggtcgagctcgaggtgctggagaagcgtcgcgtggaagaaagcgcgctg
gtcgagcgcatcgtggcgctgcgcaagcagctctcgccggcggccgtgccgcagacgcag
gcagaggcatcggacgccgacgatgtcgaagcagcgaacgtcgacgtggaccccgacacg
cctcccgtcgaaccgcagcgcacgcccgacgagatccgcgcggaactcaacgaggcgcag
gacaagctctcgcagctgcagggcgaatcgccgctcatcctcgcggccgtcgatgcacag
gccgtcgccaccgtggtggccgactggaccggcattcccatcggccgcatggtgcgcgac
gacgcgcagtcggtgctcaagctcggcgagatcctctcggcccgtgtggtcgcgcagccc
gatgcgctggagaccatctcccgccgcatccgcaccgcgcgggcacggctggacaacccc
aacaagcccgtcggcgtgttcctgctgtgcggcccttcgggtgtcggcaagaccgagacg
gcgctcgcgctctccgaagcgctgtacggcggcgagcagaacctcgtcaccatcaacatg
agcgagttccaggagtcgcacaccgtctccacgctgaagggcgcgccgcccggctacgtg
ggttatggcgaaggcggcgtgctcaccgaggccgtgcgccgcaggccctacagcgttgtg
ctgctcgacgagatcgagaaggcgcacaccgacgtgcacgagatcttcttccaggtcttc
gacaagggctggatggaagacggcgaaggccgccacatcgacttccgcaacaccgtgatc
atcatgacctccaacgtcggcaccgacctggtcatgcagctgtgcgaagacccgaccctg
cgccccgaccccgagccgctggccgccgccttgcgcgaaccgctgctcaaggtgttcgcg
cccgcgctgctcggccgcctcgttgtagtgccttattacccgttgcatgctgaggcattg
caccgcatcatccgccttcagctcgatcgcatcgcgacacgcctccaggcgaaccacggc
atcgcactggcctacgacgacagcgccgtcgaactcgtcgcgcgccgttgcaccgccatc
gaatcgggcggccggatgatcgacgcgatcctcacgcacacgatccttccgcggctgagc
gaggaagtcatcggcgccacggtcagtgcgcgcaagctgagcggcgtgcagttgagcgcc
gcgggcgacgacttccgctacgagttttccgaagcctga

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