KEGG   Variovorax sp. W6: SFB74_01500
Entry
SFB74_01500       CDS       T11181                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
vaw  Variovorax sp. W6
Pathway
vaw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SFB74_01500 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaw02044]
    SFB74_01500 (tssM)
Secretion system [BR:vaw02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SFB74_01500 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical DUF3262
Other DBs
NCBI-ProteinID: XVK59221
LinkDB
Position
345880..349542
AA seq 1220 aa
MLRAIFRFLISRDLWVFLGLVALAFLIWVIGPAIAVGRYRPLEDEIVRIVVIVLMFAIWI
VRVIYRKWRERRLNAQLLNQLRTPSKSEKEAKPEDAPEIKELQSGFTDATNILKNMRFGA
DADGKPASRFSLFDRQYLYQLPWYIFIGAPGSGKTTALVNSDLDFPLADQLGKAAVRGIG
GTRNCDWWFTNEAVLIDTAGRYTTHESNRETDEGEWKGFIELLKKFRPRQPINGAILTIS
IADLPLADDAQRARHAMALRKRLLELRNDLGIDFPVYVLVTKTDLLAGFNEYFGSLGRAE
RQQVWGFTFPIQGNPANRKAGKGTAAPVGGDLRERFHQEYKLLHQRLDERLPELLAAESD
PMRRAQAYLLPQQFASFEDILGTFLADVFNPSKFEAASMLRGVYFTSGTQEGTAFDRVMG
AIKRYLQVNAPPAPPPGPGKSYFLKELLQQVIFRDAGVAGTNLRWYRRKRAIDIAGYSVI
GVLLVLFLGACVNSWRNNKDYVAEVDTNAKAFNKAAARGELPTVVDTSGDIASSLLILDR
LRDLPKSSHFDIGDPPTSYRFGLYQGEKLQAATDGVYQRALETVLLPQAAQRVEQSLREA
AKNDAEYSYEALKAYLMLYDAERYDADFLQAWLLTDVDRKIGASLTREQRANLESHLKAL
FSGRVVTSPFAKDDKLITQTRERLAGVPLAQRSYARLRRILLQTSQPNAFTIAEAGGAES
ALVIRRASGKPLTDGIPTLFTYRGYWDIFDKRMAETALSLEQEDRWVLQIRAPGIADITS
RELLLREVRRLYLTDYIKVWDDYLVDIRLADSRSLLQSIQMTRVLSTAESPMSRIIRGAA
RETDLLRNHDEAARSLLDQAQNRVQSTRERIEQLIGQPDGSQRRNTRVDRPESLVDNHFE
PLRRMVTAPKQGGQAPIDATAALINELYNFLTATDTALRSGNIPPTSDAVTKVQAEAGRL
PVPFQGMLNDLSTTASSKAAAVTRQNIGQSAAASIGSFCNQAIAGRYPFTRGSNRDVASG
DFAQLFAPGGMMDDFFQKNLITQVDTSVNPWAFKRGVDGSAAGRSAYLDSFQKAQAIRDV
FFSGMAGGRTPSFTIDIRPEDMDAQLTQFTLDVDGQTVRYAHGPQAPSTIKWPGPRNSNQ
VRLQVTTANGTPAGGIVTEGPWALHRLFDKASISAGSSPESFNASFDLQGKKVVLAVTAN
SVYNPLRLPQMNSFSCPGKS
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgctgcgcgccatcttccgttttctcatcagccgcgacctttgggtctttctcggtctc
gtcgcgctcgccttcctgatctgggtcatcggcccggccatcgcggtgggccgctatcgc
ccgctcgaagacgagatcgtgcgcatcgtggtcatcgtgctgatgttcgcgatctggatc
gtgcgcgtcatctaccgcaagtggcgcgagcgccggctcaacgcgcaactgctcaaccag
ttgcgcactccttccaagagcgagaaagaggccaagcccgaggacgcccccgagatcaag
gagctgcaaagcggcttcaccgacgcgacgaacatcctgaagaacatgcgcttcggcgcg
gatgccgacggcaagcccgcgagccgcttctcgctgttcgaccggcagtacctgtaccag
ctgccctggtacatcttcatcggcgcgccgggctcgggcaagaccaccgcgctggtcaac
tccgacctcgacttcccgctggctgaccagctcggcaaggcggcggtgcgaggcatcggc
ggcacgcgaaactgcgactggtggttcaccaacgaggcggtgctgatcgacacggccggc
cgctacaccacgcacgagagcaaccgcgagaccgacgagggcgagtggaagggcttcatc
gagttgctgaagaagttccgcccgcgccagccgatcaacggcgcgatcctcaccatcagc
atcgccgacctgccgctggctgacgacgcgcagcgcgcgcgccacgcgatggcgctgcgc
aagcggctgctggagctgcgcaacgacctgggcatcgacttcccggtgtacgtgctggtc
accaagaccgacctgctggccggcttcaacgaatacttcggctcgctgggccgcgccgag
cggcagcaggtgtggggcttcaccttcccgatccagggcaacccggcgaacaggaaggcc
ggcaagggcacggcggcacccgtgggcggcgacctgcgcgagcgcttccaccaggaatac
aagctgctgcaccagcgcctggacgagcgcctgcccgagctgctggcggccgagtccgac
ccgatgcgccgcgcgcaggcctacctgctgccgcagcagttcgcgagcttcgaggacatc
ctcggcaccttcctggccgatgtgttcaacccgtcgaagttcgaggccgcgtcgatgctg
cgcggcgtgtacttcaccagcggcacgcaggaaggcaccgccttcgaccgcgtgatgggc
gccatcaagcgctacctgcaggtcaacgcaccgccggcaccgccgccgggcccgggcaag
agctacttcctgaaggaactgctgcagcaggtgatcttccgcgacgcgggcgtggccggc
accaaccttcgctggtaccggcgcaagagggccatcgacatcgcgggctacagcgtgatc
ggcgtgctgctggtgctgttcctcggcgcctgcgtgaacagctggcgcaacaacaaggac
tacgtggccgaggtcgacaccaacgccaaggccttcaacaaggccgcggcgcgcggcgag
ctgcccacggtggtcgacaccagcggcgacatcgccagctcgctgctcatcctcgacagg
ctgcgcgacctgccgaagtccagccacttcgacatcggcgatccgcccacctcctaccgc
ttcggcctctaccagggcgagaagctgcaggcggccaccgacggcgtctaccagcgcgcg
ctcgaaaccgtgctgctgccgcaggccgcgcagcgcgtggaacagtcgctgcgcgaagcc
gcgaagaacgacgccgaatacagctacgaggcgctcaaggcctacctgatgctgtacgac
gccgagcgctacgacgccgacttcctgcaggcctggctgctcaccgacgtggaccgcaag
atcggcgcctcgctcacgcgcgagcagcgcgccaacctcgagtcgcacctgaaggcgctg
ttctcgggccgcgtggtgacctcgcccttcgcgaaggacgacaagctcatcacgcagacg
cgcgaacgtctggccggcgtgccgctggcgcagcgctcgtacgcgcggctgcgccgcatc
ctgctgcagaccagccagcccaatgccttcacgatcgccgaggcgggcggcgccgagtct
gcgctggtcatccggcgcgcgagcggcaagccgctgaccgacggcatcccgacgctcttc
acctaccgcggctactgggacatcttcgacaagcgcatggccgagaccgcgctgtcgctc
gagcaggaagaccgctgggtgctgcagatccgcgcgcccggcatcgccgacatcacctcg
cgcgagctgctgctgcgcgaagtgcgccggctctacctcaccgactacatcaaggtgtgg
gacgactacctcgtcgacatccgcctggccgacagccgctcgctgctgcagagcatccag
atgacgcgcgtgctctccaccgccgaatcgccgatgtcgcgcatcatccgcggcgccgcg
cgcgaaaccgacctgctgcgcaaccacgacgaggccgcgcgcagcctgctcgaccaggcg
cagaaccgcgtacagagcacgcgagagcgcatcgagcagctcatcggccagcccgacggc
agccagcgccgcaacacgcgcgtggatcgccccgagtcgctggtggacaaccacttcgag
ccgctgcgccgcatggtgaccgcccccaagcagggcggccaggcgcccatcgacgcgacg
gccgcgctcatcaacgagctctacaacttcctcaccgcaaccgataccgcgctgcgcagc
ggcaacatcccgccgaccagcgacgccgtcaccaaggtgcaggccgaggccgggcggctg
ccggtgccgttccagggcatgctgaacgatctctccaccaccgcgtcgtcgaaggcggcg
gcggtgacgcggcagaacatcgggcagagcgcggcggccagcatcggctcgttctgcaac
caggcgatcgcggggcgctatccgttcacgcgcggctccaaccgcgacgtggcttctggc
gacttcgcgcagctattcgcgccgggcgggatgatggacgacttcttccagaagaacctc
atcacgcaggtcgacacctcggtcaacccgtgggccttcaagcgcggcgtggacggcagc
gcggccgggcgctcggcatacctcgattccttccagaaggcgcaggccatccgcgacgtg
ttcttctcgggcatggcgggcgggcgcacgccttcgttcaccatcgacatccggcccgag
gacatggacgcgcagctcacgcagttcacgctcgacgtcgacggccagacggtgcgctac
gcgcacggcccgcaggcgcccagcaccatcaagtggccgggcccgcgcaacagcaaccag
gtgcgcctgcaggtgaccaccgccaacggcacgccggccggcggcatcgtgaccgaaggg
ccgtgggcgctgcaccggctgttcgacaaggcctccatctcggcgggcagctcgcccgag
tcgttcaacgcgagcttcgacctgcagggcaagaaggtggtgctcgcggtcacggccaac
agcgtctacaacccgctgcgcctgccgcagatgaacagcttctcctgccccgggaagtcc
tga

DBGET integrated database retrieval system