Variovorax sp. W6: SFB74_02075
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Entry
SFB74_02075 CDS
T11181
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00550
Peptidoglycan biosynthesis
vaw01100
Metabolic pathways
vaw01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SFB74_02075 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SFB74_02075 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vaw01011
]
SFB74_02075 (mrdA)
Enzymes [BR:
vaw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SFB74_02075 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vaw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SFB74_02075 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
XVK59333
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Position
483010..484980
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AA seq
656 aa
AA seq
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MTEIRNVAADLARFKRRVIVIGLAVLFAFGLLCARLVYLQVTRHEDLAEQAESNRTAVVP
VVPNRGLILDRNGIVLASNYSAYTLEITPSKVGDVEETIDSLTQVLEVSPRDRRRFKRLR
EDSRSFDSIPIRTRLSDEEVARFAAQRYRFPGVEIKARLFRNYPQGELASHVLGYIGRIN
QREKTAMEDWDEEDQANYKGTDYIGKLGIEQSYEKTLHGQTGVEQMETSAGGRAVRRLAS
HPATPGNTVMLSLDIKLQKLVEDMYGERRGALVAIDPKTGEILAFVSKPTFDPNLFVEGI
DNESWAALTESIDKPLLNRALRGTYPPGSTYKPFMALAALQTGKRGPSVVVNDPGYFNFG
GHRFGSPEGNLGGVDMRRSIQLSSNIYYYSLANEMGVDLIHDFMKPLGFGQITGIDLGGE
VRGVLPSTEWKRNTYKRPEQKKWYAGETISLGIGQGYNNFTMLQLAQATAVIANGGLKHK
PHLALATRDTVSGNVVPLPQPAAENLGFTAANISVIREGLTSVVTSGTARGVFAGASYQA
AGKTGTAQAVSMGQNTKYNARALEEHQRDHALFMAYAPVNDPKIALAVIVENAGWGAGAA
APIARRVFDYWLADQYPSEADMAAIKIGKATAPIGKPRIASEVAWPAASATPATAP
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatccgcaatgtcgccgccgacctcgcgcgcttcaagcgccgcgtgatcgtc
atcgggttggcggtgctcttcgcgttcgggctgctgtgcgcgcgactggtctacctgcag
gtcacgcgccacgaagacctggccgagcaggccgagagcaaccgcacggcggtggtgccg
gtggtgcccaaccgggggctcatcctcgatcgcaacggcatcgtgctggcctccaactac
tcggcctacacgctggagatcacgccctcgaaggtgggcgacgtcgaggagaccatcgac
agcctcacccaggtgctcgaagtctcgccgcgcgaccgccgccgcttcaagcgcctgcgc
gaggactcgcgcagcttcgactccattccgatccgcacccgcctgagcgacgaggaagtc
gcgcgcttcgcggcccagcgctaccgcttcccgggcgtggagatcaaggcgcgcctcttt
cgcaactacccgcagggcgagctggcctcgcacgtgctcggctacatcggccgcatcaac
cagcgcgagaagaccgcgatggaagactgggacgaggaagaccaggccaactacaagggc
accgactacatcggcaagctcggcatcgagcagagctacgagaagacgctgcacggccag
accggcgtcgagcagatggaaacctccgccggcggccgcgccgtgcgccgcctcgccagc
catcccgccacgccgggcaacacggtcatgctgtcgctcgacatcaagctgcagaagctg
gtggaggacatgtacggcgagcgccgcggagcgctggtggccatcgaccccaagaccggc
gagatcctcgccttcgtgagcaagcccaccttcgacccgaacctcttcgtcgaaggcatc
gacaacgaaagctgggccgcgctcaccgagtccatcgacaagccgctgctgaaccgcgcc
ctgcgcggcacctacccgcccggctccacctacaagcccttcatggcgctggcggcactg
cagaccggcaagcgcggccccagcgtggtggtgaacgaccccggctacttcaacttcggc
ggccaccgcttcggcagccccgagggcaacctgggcggcgtcgacatgcgccgctcgatc
cagctgtcgagcaacatctactactactcgctggccaacgagatgggcgtggacttgatc
cacgacttcatgaagccgctgggcttcggccagatcaccggcatcgacctcggcggcgag
gtgcgcggcgtgctgcccagcaccgagtggaagcgcaacacctacaagcggcccgagcag
aagaagtggtacgcgggcgagaccatctcgctgggcatcggccagggctacaacaacttc
accatgctgcagctggcgcaggccaccgccgtcatcgccaatggcggcctcaagcacaag
cctcatctcgcgctggccacgcgcgacaccgtgagcggcaacgtggtgcccctgccgcag
cccgcggcggagaacctgggcttcacggcggccaacatctcggtgatccgcgagggcctg
accagcgtggtcaccagcggcaccgcgcgcggcgtgttcgcgggtgccagctaccaggcg
gcgggcaagacgggtacggcgcaggccgtgtcgatgggccagaacaccaagtacaacgcg
cgcgcgctcgaggagcaccagcgcgaccacgcactcttcatggcgtatgcgccggtgaac
gacccgaagatcgccctggcggtgatcgtggagaacgcgggctggggcgcaggcgcggcc
gctcccatcgcgcgccgggtgttcgactactggctcgccgaccagtacccgagcgaggcc
gacatggccgccatcaagatcggcaaggcgacagcgccgatcggcaagccgcgcatcgcg
agcgaagtggcctggcccgcggcctcggccacgcccgctactgcgccctga
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