Variovorax sp. W6: SFB74_03215
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Entry
SFB74_03215 CDS
T11181
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00280
Valine, leucine and isoleucine degradation
vaw00650
Butanoate metabolism
vaw00907
Pinene, camphor and geraniol degradation
vaw01100
Metabolic pathways
vaw01120
Microbial metabolism in diverse environments
vaw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SFB74_03215
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SFB74_03215
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SFB74_03215
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SFB74_03215
Enzymes [BR:
vaw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
SFB74_03215
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Motif
Pfam:
HMGL-like
Gp49_Pectate_lyase_like
Motif
Other DBs
NCBI-ProteinID:
XVK59557
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Position
738856..739791
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AA seq
311 aa
AA seq
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MTPPDVLISEVGPRDGLQSVKATMPTADKLRWIDALYAAGVREIEVASFVPAKLLPQMAD
AAEVVRHAVTLPGLVVMALVPNRKGAQAALEAGAHKLTMPVSASVAHSLANVRKTPTEMV
EEVRAISELRREIAPQVRLEAGISTAFGCTLQGLVPEDDVIRLAAQCIGAGADESGLSDT
VGYANPAQVRRLFKRLRAEIGRHAGAAHMHNTRGLGIANCLAAWDEGVRTFDASLGGLGG
CPYAPGASGNAVTEDLVFMFEAMGVRTGIDIQKLIAARAPLMAGLPGEPVYGMTPEAGLP
KGFVQEHIAHV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccccgacgtccttatcagcgaggtcggtccgcgcgacggcctgcagtcggtc
aaggccaccatgcccaccgccgacaagctgcgctggatcgacgcgctctacgccgccggc
gtgcgcgagatcgaggtcgcttccttcgtgcccgcgaagctgctgccgcagatggccgat
gccgccgaggtggtgcgccatgccgtcacgctgcccggcctggtggtgatggcgctggtg
cccaaccgcaagggcgcgcaggccgcgctcgaggccggtgcgcacaagctcacgatgccg
gtgtcggccagcgtggcgcattcgctggccaacgtgcgcaagacgcccaccgaaatggtc
gaggaggtgcgcgccatttccgagctgcgccgcgagatcgcgccgcaggtgaggctcgag
gccggcatctccaccgccttcggctgcacgctgcagggcctggtgcccgaggacgacgtg
atccgcctggccgcgcaatgcatcggtgccggtgccgacgaatcgggcctgtccgacacc
gtgggctacgccaaccccgcgcaggtgcgccgcctcttcaagcggctgcgcgccgagatc
ggcaggcacgccggcgcggcccacatgcacaacacgcgcggcctcggcatagccaactgc
ctcgcggcctgggacgagggcgtgcgcaccttcgacgcatcgctcggcggactcggcggc
tgcccgtatgcgccgggtgcctcgggcaacgcagtcaccgaagatctggtcttcatgttc
gaagccatgggcgtgcgcaccggcatcgacatccagaaactcatcgcggcgcgcgcgccg
ctcatggccggcctgcccggcgaaccggtctacggcatgacgcccgaggccggcctgccg
aaaggctttgtccaggaacacatcgctcatgtctga
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