Variovorax xiamenensis: SFB74_04475
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Entry
SFB74_04475 CDS
T11181
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vaw Variovorax xiamenensis
Pathway
vaw00521
Streptomycin biosynthesis
vaw00523
Polyketide sugar unit biosynthesis
vaw00525
Acarbose and validamycin biosynthesis
vaw00541
Biosynthesis of various nucleotide sugars
vaw01100
Metabolic pathways
vaw01110
Biosynthesis of secondary metabolites
vaw01250
Biosynthesis of nucleotide sugars
Module
vaw_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SFB74_04475 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFB74_04475 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SFB74_04475 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFB74_04475 (rfbB)
00525 Acarbose and validamycin biosynthesis
SFB74_04475 (rfbB)
Enzymes [BR:
vaw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SFB74_04475 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
XVK59789
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All DBs
Position
1054887..1055963
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AA seq
358 aa
AA seq
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MILVTGGAGFIGANFVLDWIANSDEPVINLDKLTYAGNLETLASLKGNPKHIFVQGDIGD
SALIDRLLAEHKPRAVVNFAAESHVDRSIHGPEDFVQTNVLGTFRLLESVRGFWSALPAD
QKSAFRFLHVSTDEVYGSLSKTDPAFTEENKYEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPFHFPEKLIPLMIVNALAGKSLPVYGDGMQVRDWLYVKDHCSAIRRVLEA
GKLGETYNVGGWNEKPNIEIVNTVCALLDELRPRADGKPYKEQVTYVTDRPGHDRRYAID
ARKLEAELGWKPAETFDTGIRKTVEWYLANSEWVRNVQSGAYREWVEKQYDNNAKAAA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggttaccggcggtgccggcttcatcggcgccaatttcgtactcgactggatc
gcgaacagcgacgagcccgtcatcaacctcgacaagctgacctacgcgggcaacctcgag
acgctcgcgtcgctcaagggcaacccgaagcacatcttcgttcagggcgacatcggcgac
agcgccctcatcgaccgcctgctggccgagcacaagccgcgcgccgtcgtgaacttcgcc
gccgagtcgcatgtcgaccgctcgatccacggccccgaagacttcgtgcagaccaacgtg
ctcggcaccttccgcctgctcgagtcggtgcgtggcttctggagcgcgctgccggccgat
cagaagtcggccttccgcttcctgcacgtgtcgaccgacgaggtctacggctcgctctcc
aagaccgacccggccttcaccgaagagaacaagtacgagccgaacagcccctactcggcc
agcaaggcggccagcgaccacctcgtgcgcgcctggcaccacacctacggcctgccggtg
ctgaccaccaactgctcgaacaactacggcccgttccacttccccgagaagttgatcccc
ctgatgatcgtcaacgcgctggccggcaagagcctgcccgtgtatggcgacggcatgcag
gtgcgtgactggctctacgtgaaggaccactgcagcgccatccgccgagtgctcgaagcc
ggcaagctcggcgagacctacaacgtgggcggctggaacgagaagcccaacatcgagatc
gtcaataccgtgtgcgcgctgctcgacgaactgcgcccccgtgccgacggcaagccctac
aaggaacaggtcacctacgtcacggaccgtcccggccatgatcgccgctacgccatcgac
gcgcgcaagctcgaagccgaactcggctggaagcccgccgaaaccttcgacaccggcatc
cgcaagaccgtggagtggtacctcgcgaacagcgagtgggtgcgcaacgttcaaagcggc
gcctaccgcgaatgggtcgagaagcagtacgacaacaacgcgaaggccgcggcatga
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