KEGG   Variovorax sp. W6: SFB74_05270
Entry
SFB74_05270       CDS       T11181                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vaw  Variovorax sp. W6
Pathway
vaw00300  Lysine biosynthesis
vaw00470  D-Amino acid metabolism
vaw01100  Metabolic pathways
vaw01110  Biosynthesis of secondary metabolites
vaw01120  Microbial metabolism in diverse environments
vaw01230  Biosynthesis of amino acids
Module
vaw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vaw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SFB74_05270 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SFB74_05270 (dapF)
Enzymes [BR:vaw01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SFB74_05270 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: XVK59939
LinkDB
Position
1220024..1220899
AA seq 291 aa
MRIRFTKMQGAGNDFVVLDETRGTLGLSAAQYRFLADRHFGVGADQILTVRPSPAEGIDF
QYVIHNSDGGEVEQCGNGARCFMRFVSEHHLTEKKQVRVQTLSGVIEPRMGGDGRVTVDM
GAPIFEPARVPFDPAGLDPQPEGGWHKWHLALGTRAGSAIVSVAVLSMGNPHAVQVVDNV
DTAPVAEQGPQIEHHPRFPQRVNAGFMQVVDRSNIRLRVFERGAGETLACGTGACAAVVA
GIRLGLLERRVDVQTHGGVLTIEWQGEGQPVLMTGPAVTVFEGDIEVPELP
NT seq 876 nt   +upstreamnt  +downstreamnt
atgcgaatccgctttaccaagatgcagggagccggcaacgatttcgtcgtgctggacgaa
acgcgcggcacgctgggcctcagcgccgcgcaataccgctttctggccgaccgccacttc
ggcgtcggcgccgaccagatcctcacggtgcggccttcgcctgccgagggcatcgacttc
cagtacgtgatccacaactccgacggcggcgaggtggagcagtgcggcaacggcgcgcgc
tgcttcatgcgcttcgtgagcgaacaccacctgaccgagaagaagcaggtgcgtgtgcag
accctctccggcgtcatcgaaccccgcatgggcggcgacggccgcgtgacggtcgacatg
ggcgcccccattttcgaacccgcgcgcgtgcccttcgaccccgccgggctcgatccgcag
cccgaaggcggctggcacaagtggcacctggcgctgggcacccgcgccggcagcgctatc
gtttcagtagctgtgctctcgatgggcaacccgcacgccgtgcaggtggtggacaacgtc
gacaccgccccggtggccgagcagggcccgcagatcgagcaccacccgcgttttccgcag
cgggtgaatgccgggttcatgcaggttgtcgatcgttccaacatcaggctgcgggtgttc
gagcgcggcgccggcgaaacgctggcctgcggcaccggtgcctgcgcggcggtggtggcg
ggcatccgcctcgggctgctggagcgccgcgtggatgtgcagacgcacggcggcgtgctg
acgatcgagtggcagggggagggccagccggtgctgatgaccgggccggccgtcacggtc
ttcgagggagacatcgaggtgccggagctgccatga

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