Variovorax sp. W6: SFB74_06315
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Entry
SFB74_06315 CDS
T11181
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vaw Variovorax sp. W6
Pathway
vaw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFB74_06315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_06315
Transporters [BR:
vaw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SFB74_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XVK60142
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All DBs
Position
1459283..1460866
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AA seq
527 aa
AA seq
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MSFKKNVAAAAVLCALGAVSMVAGAQTIRIANQGDALSLDPHSLNESLQLSVTANVYETL
VGRNKDLTLAPLLATSWKQTSPNVWRFELRKGVVFHDGTPFTADDVVFSFARAQGDGSDM
RATLSDIKAVRKVGDLAVEIETNGPFPILPDVISLTMIMSKKWCEENQATKPVDRRKGIE
NTASFKANGTGPFRVRERQPNVRTVFTRNGTYWGKIDGNAQEIVFTPIANPATRVAALVS
GEVDVMEPVPVQDIARINAAPNARVITGPELRTIFLGMDQKRDELQYSNIKGKNPFKDKR
VRQAFYQAIDIAGIQRTVMRGASRPTALLVGPGINGWTAEQDKRLPYDVDAAKKLLTEAG
YPNGFEVSLNCPNDRYVNDGQVCQSVASNLAKIGVKVNLVAETKGTYFPKVLRRDTSFYM
LGWTPTTYDAHNALSSLTACPDDKGTGQFNLGAYCNPKLDELTKKIQSETDKAKRNEMIK
EAFKIHADDVGHLPLHQQSLAWGVSKKVELVQLADNFMYFKWMSIKP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaagaagaatgtggccgcggccgccgttttgtgcgccctgggcgccgtcagc
atggtcgccggcgcgcagaccatccgaatcgcgaaccagggggacgcgctatcgctggac
ccgcactcgctgaacgagtcgctgcagctgagcgtcactgccaacgtctatgaaaccctc
gtgggacgcaacaaggacctgacccttgccccgctgctggccaccagctggaagcagacc
tcgccgaacgtctggcgcttcgaactgcgcaagggcgtggtgttccacgacggcacgccg
ttcaccgccgacgacgtggtgttcagcttcgcgcgcgcccagggcgacggctccgacatg
cgcgccacgctcagcgacatcaaggccgtgcgcaaggtcggcgacctcgccgtcgagatc
gagaccaacggcccgttccccatcctgcccgacgtgatctcgctgacgatgatcatgagc
aagaaatggtgcgaggaaaaccaggccaccaagccggtggaccgccgcaagggcatcgag
aacacggcctccttcaaggccaacggcaccggcccgttccgcgtgcgcgagcgacagccg
aacgtgcgcaccgtgttcacgcgcaacggcacctactggggcaagatcgacggcaacgcg
caggagatcgtcttcacgcccatcgccaaccccgccacccgcgtggccgcgctggtctcc
ggcgaggtcgacgtgatggagccggtgccggtgcaggacatcgcccgcatcaacgccgcg
cccaacgcgcgcgtgatcaccggccccgagctgcgcaccatcttcctgggcatggaccag
aagcgcgacgaactgcagtactcgaacatcaagggcaagaacccgttcaaggacaagcgc
gttcgccaggccttctaccaggccatcgacatcgccggcatccagcgcaccgtgatgcgc
ggcgcctcgcgtcccaccgcgctgctggtcggccccggcatcaacggctggaccgccgag
caggacaagcgcctgccctacgacgtcgatgccgccaagaagctgctgaccgaagccggc
taccccaacggcttcgaggtgtcgctgaactgcccgaacgaccgctatgtcaacgacggc
caggtctgccagagcgtggcttccaacctcgcgaagatcggcgtcaaggtcaacctcgtg
gccgagaccaagggcacctacttcccgaaggtgctgcgccgcgacaccagcttctacatg
ctgggctggaccccgaccacctacgacgcgcacaacgcgctgagctcgctcacggcctgc
ccggacgacaagggcaccggccagttcaacctgggcgcgtactgcaaccccaagctcgac
gagctgaccaagaagatccagtcggagaccgacaaggccaagcgcaacgagatgatcaag
gaggcgttcaagatccacgccgacgacgtgggtcacctgccgctgcatcagcagtcgctg
gcgtggggcgtgagcaagaaggtggagctggtgcaactggccgacaacttcatgtacttc
aagtggatgagcatcaagccctga
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