Variovorax sp. W6: SFB74_06455
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Entry
SFB74_06455 CDS
T11181
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vaw Variovorax sp. W6
Pathway
vaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFB74_06455 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaw03019
]
SFB74_06455 (groL)
03110 Chaperones and folding catalysts [BR:
vaw03110
]
SFB74_06455 (groL)
03029 Mitochondrial biogenesis [BR:
vaw03029
]
SFB74_06455 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vaw04147
]
SFB74_06455 (groL)
Enzymes [BR:
vaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SFB74_06455 (groL)
Messenger RNA biogenesis [BR:
vaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SFB74_06455 (groL)
Chaperones and folding catalysts [BR:
vaw03110
]
Heat shock proteins
HSP60 / Chaperonin
SFB74_06455 (groL)
Mitochondrial biogenesis [BR:
vaw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SFB74_06455 (groL)
Exosome [BR:
vaw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SFB74_06455 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SFB74_06455 (groL)
Exosomal proteins of breast cancer cells
SFB74_06455 (groL)
Exosomal proteins of colorectal cancer cells
SFB74_06455 (groL)
Exosomal proteins of bladder cancer cells
SFB74_06455 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XVK60168
LinkDB
All DBs
Position
complement(1491615..1493267)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGINPMDLKRGI
DKAVSALVEELKKASKPTTTSKEIAQVGSISANSDETIGKLIADAMDKVGKEGVITVEDG
KSLESELDVVEGMQFDRGYLSPYFINNPEKQSALLDNPFVLLFDKKISNIRDLLPTLEQV
AKAGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLTLEKVTLADLGQAKRIEVGKENTIIIDGAGAAADIEARVKQVRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL
RAKQAVGDKVKGDNADQDAGIKLVLKAIEAPLREIVNNAGGEASVVVNAVLAGKGNYGFN
AANDTYGDMLELGILDPTKVTRTALQNAASVSSLLLTTEAMVADAPKDDAPAGGGMPDMG
GMGGMGGMGM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtagtcttcggcggcgaagcccgcgcacgcatggtcgagggtgtg
aacatcctggccaacgcagtcaaggtgaccctgggccccaagggccgcaacgtggtgctc
gagcgctcgttcggcgcccccaccgtcacgaaggacggcgtgtcggtcgccaaggaaatc
gaactgaaggacaagctgcagaacatgggcgcccagctcgtgaaggaagtggcctccaag
accagcgacaacgccggtgacggcaccaccaccgcgaccgtgctggctcaagccatcgtt
cgcgaaggcttcaagtacgtggccgccggcatcaacccgatggacctgaagcgcggcatc
gacaaggccgtgtcggccctggtcgaagagctgaagaaggcttcgaagcccaccaccacg
tcgaaggaaatcgcccaagtcggctcgatctcggccaacagcgacgaaaccatcggcaag
ctcatcgccgacgcgatggacaaggtcggcaaggaaggcgtgatcactgtcgaagacggc
aagtcgctcgaaagcgaactggacgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccctacttcatcaacaaccccgagaagcaatcggcgctgctcgacaaccccttcgtg
ctgctgttcgacaagaagatcagcaacatccgtgacctgctccccacgctggaacaagtc
gccaaggctggccgtcccctgctgatcattgccgaagaagtcgaaggcgaagccctggct
acgctggtcgtgaacacgatccgcggcatcctgaaggtcgtggccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggcaaggtc
atcgctgaagaagtgggcctgacgctcgagaaggtgacgctggccgacctgggccaggcc
aagcgcatcgaagtgggcaaggaaaacaccatcatcatcgacggcgccggcgctgctgcc
gacatcgaagcccgcgtgaagcaagtgcgcgtgcagatcgaagaagccacgagcgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gtcggcgctgccaccgaagtcgaaatgaaggaaaagaaggctcgcgtcgaagacgccctg
cacgccacccgcgctgcagtggaagaaggcgtagttgccggcggcggcgtggctctgctg
cgtgccaagcaagccgtgggcgacaaggtcaagggcgacaacgccgaccaggacgccggc
atcaagctggtgctgaaggccatcgaagctcccctgcgcgaaatcgtgaacaacgccggc
ggcgaagcctcggtggtggtgaacgcggttctggccggcaagggcaactacggcttcaat
gctgcgaacgacacgtacggcgacatgctcgagctgggcatcctggacccgacgaaggtc
acccgcaccgcactgcagaacgccgcttcggtgtcctcgctgctgctgacgaccgaagcc
atggtggctgacgctccgaaggacgacgctcctgccggcggcggcatgcccgacatgggc
ggcatgggtggcatgggcggcatgggcatgtaa
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