Variovorax sp. W6: SFB74_08790
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Entry
SFB74_08790 CDS
T11181
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaw03016
]
SFB74_08790 (truA)
Enzymes [BR:
vaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SFB74_08790 (truA)
Transfer RNA biogenesis [BR:
vaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SFB74_08790 (truA)
Prokaryotic type
SFB74_08790 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
XVK60621
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All DBs
Position
complement(2010516..2011328)
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AA seq
270 aa
AA seq
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MRLALGIRYNGQAYDGWQSQPSGRTVQDKLEAALTKFTAQPVRTLCAGRTDAGVHALMQV
VHFDTTVHREPFSWMRGTNRFLPDDIAVQWAHPVPDEFHCRASALARRYVYVLSQSPVRP
SLDSGRVGWSMHPLDGDAMRAAAALLIGQHDFSSFRASACQARSPIKDLRRIEITRVGSG
ERCRWHFEFEADAFLHHMIRNLMGSLLRVGRGDERPEWISQVLEARSRDAAAPTFSADGL
YFMGPLYDAKWGLPDEATLQAGGAPYDGPP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctggcgctcggcatccggtacaacggccaagcgtacgacggctggcagagccag
ccctcgggccgcacggtgcaggacaagctcgaagccgccctcacgaagttcaccgcacag
cccgtcaggacgctgtgcgccgggcgcaccgacgcgggcgtccacgccctgatgcaggtg
gtgcacttcgacaccaccgtgcatcgcgaacccttctcctggatgcgcggcaccaaccgc
ttcctgcccgacgacatcgcggtgcagtgggcgcatcctgtgcccgacgagttccactgc
cgcgccagcgcccttgcgcgccggtatgtctacgtgctctcgcagtcccccgtgcggccc
agcctcgattcgggccgggtcggctggtcgatgcatccgctcgatggcgacgccatgcgc
gccgccgcggcgctgctgatcggccagcacgacttcagctcgttccgcgcctcggcctgc
caggcgcgttcgccgatcaaggatctgcggcgcatcgagatcacgcgcgtcggcagcggc
gagcgctgccgctggcatttcgagttcgaggccgacgccttcctgcaccacatgatccgc
aacctgatgggtagcctccttcgcgtcggccgcggcgacgagcggccggagtggatctcg
caggtgctcgaggcacgcagccgcgatgcggcggcgcccaccttctccgcggacggtctc
tatttcatgggcccgttgtacgacgccaagtggggtctgccggacgaagccacgctgcag
gccggcggggctccgtatgatggcccgccatga
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