Variovorax sp. W6: SFB74_09880
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Entry
SFB74_09880 CDS
T11181
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaw03032
]
SFB74_09880 (gyrA)
03400 DNA repair and recombination proteins [BR:
vaw03400
]
SFB74_09880 (gyrA)
Enzymes [BR:
vaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SFB74_09880 (gyrA)
DNA replication proteins [BR:
vaw03032
]
Prokaryotic type
DNA Topoisomerases
SFB74_09880 (gyrA)
DNA repair and recombination proteins [BR:
vaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SFB74_09880 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XVK60827
LinkDB
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Position
complement(2247252..2249897)
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AA seq
881 aa
AA seq
DB search
MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSQLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLYLLRNPQASIDELMEIVPAPDFPTAGIIYGINGVKDGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIEVFLQHRRE
VVTRRTVFNLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLV
REMLTRTRADGGVVNADDYRPEGLEREFGMGNDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKEVMAEIDDLLDILAKPERVSTIIGDELGTLKQEFGQSKVGARRSQVEHSAYDL
STEDLITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATTTKDDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ
YVFMATSMGTVKKTALDEFSNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDGGKAV
RFDEEDVRPLGRNARGVRGMSLEAGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT
LIGLDEGAKLSGLQRIVENDANGETEPDADDTSSSSTENPQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttcgcaaaagaaaccctgcccatcagtctcgaagaggaaatgcgcagcagc
tatctcgattacgccatgagcgtgatcgtgggccgagcgctccccgatgcccgtgacggc
ctcaagccggtgcaccgccgcgtgctctacgcgatgcacgagctcaacaacgactggaac
cgcccgtacaagaagtcggcccgtatcgtcggcgacgtcatcggtaagtaccacccccac
ggcgaccagtcggtctacgacaccatcgttcgcctggcccaggacttctcgatgcgccac
atgctggtcgacggccagggcaacttcgggtctgtcgatggagacaacgcagccgcaatg
cggtatacggaaatccggctggccaaaattgcgcacgaaatgctggccgatatcgacaag
gaaactgtcgactttcaggacaattacgacggctccgaaaaagagcccaaggtgctgccg
agccagctgccgaatttgctggtcaatggctccggcggtattgcggtcggcatggccacg
aatatcccgccgcacaacctgaacgaggtggtggacgcctgcctgtacctgctgcgcaac
ccccaggctagcatcgacgagctgatggagatcgtgcccgcgcccgacttccccaccgcc
ggcatcatctacggcatcaacggcgtgaaggacggctaccgcaccggccgcggcaaggtc
gtgatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccaggcgatcatc
gtcgacgagctcccctaccaggtcaacaagaagacgctgcaggagcgcatggccgagctg
gtgcacgagaagaagatcgaaggcatcagccacatccaggacgagtccgacaagtcgggc
atgcgcctggtcatcgagctcaagcgcggcgaagtgcccgaggtggtgctcaacaacctc
tacaagcagacgcagctgcaggacaccttcggcatcaacatggtggcgctggtcgacggc
cagccgaagctgtgcaacctgaaggacctgatcgaggtcttcctgcagcaccgccgcgaa
gtggtcacccgccgcacggtcttcaacctgcgcaaggcccgcgagcgcggccatgtgctc
gaaggcctggcggtggcgctggcgaacatcgacgagttcatccgcatcatccgcgagtcg
cccacgccgcccgtggccaaggccgagctcatgacgcgcagctgggacagcaagctggtg
cgcgagatgctcacgcgcacgcgcgccgacggcggcgtggtcaacgcggacgactatcgc
cccgagggcctcgagcgcgagttcggcatgggcaacgacggcctctaccgtctgtcggaa
acgcaggcccaggaaatcctgcagatgcgcctgcagcgcctgaccggcctcgagcaggac
aagatcgtcgccgagtacaaggaagtcatggccgagatcgacgacctgctcgacatcctg
gccaagcccgagcgcgtctcgaccatcatcggcgacgaactcggcaccctcaagcaggag
ttcggccagtcgaaggtcggcgcgcgccgcagccaggtggagcacagcgcctacgacctc
tcgaccgaagacctgatcacgccgaccgacatggtggtcacgctctcgcacagcggctac
atcaagagccagccattgggcgaataccgagcgcagaagcgcggcggccgcggcaagcag
gccaccaccaccaaggacgacgactggatcgatcagctcttcatcgccaacacgcacgac
tacatcctgtgcttctccaaccgcggccggctctactggctcaaggtgtgggaagtgccg
gcgggttcgcgcggctcgcgcgggcgtcccatcgtcaacatgttcccgctgcaggaaggc
gagaagatcaacgtcgcgctcgcgctgacgggtgaaaagcgcaacttcccggcggaccag
tacgtgttcatggcgacctcgatgggcacggtcaagaagaccgcgctcgacgagttcagc
aacccgcgcaagggcggcatcatcgccgtcaacctcgacgagggcgactacctgatcggc
gcggcactcaccgacggcaagcacgacgtgatgctcttcagcgacggcggcaaggccgtg
cgcttcgacgaggaagacgtccgcccgctgggccgcaatgcccgcggcgtgcgcggcatg
tcgctcgaggccggacaaggcgtgatcgccatgctggtggccgaggacgagcagcagagc
gtgctcaccgccacggaaaatggttacggaaagcgaacaagcattaccgaatacacccgt
cacggacggggaaccaagggcatgatcgcgattcaacagagtgagcgcaacggcaaggtc
gtcgccgccactctcgtgcacgccgatgatgagatcatgctcatcaccgacaagggtgtg
ctggtgcgcacccgggttgccgaaattcgagagctgggtcgcgcgacgcaaggcgttacg
ctgatcgggctcgacgaaggcgccaaactcagcgggctacaacgtatcgtcgaaaacgac
gcgaacggcgaaaccgagcctgacgcagacgatacttcctcatcttcaacggagaatcct
cagtga
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