KEGG   Variovorax sp. W6: SFB74_10340
Entry
SFB74_10340       CDS       T11181                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vaw  Variovorax sp. W6
Pathway
vaw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SFB74_10340 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaw02044]
    SFB74_10340 (tssH)
Secretion system [BR:vaw02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SFB74_10340 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N ClpB_D2-small AAA_22 AAA_16 NBD_SMAX1 TniB AAA_7 nSTAND3 IstB_IS21 Sigma54_activat Zeta_toxin AAA_25 NACHT ResIII DUF815 SRP54 T2SSE SLFN-g3_helicase HGD-D CxC7
Other DBs
NCBI-ProteinID: XVK60916
LinkDB
Position
complement(2362586..2365324)
AA seq 912 aa
MDIDIRTLLGRLNPECKRAMEQAAELCVQQTHYNVDIEHLLMKLVDNEAPDLRLVFGRFG
IRPDTVQAQLQKSLDTFKRGNGRTPSLAPDFAPLFQEAWLMSSMLLGQQHVRSGTLMLAL
LEVDRLRGRLVDAAPALLQIPRGSLRDELAGLLQSSPEDAAGAALAAAPIAPAPSVPAAS
QPAAPQPAPETGAMQMPTARRSSSATPSLDQYTVDMTQLARDGAIDPIRGRDGEIRQIID
VLLRRRQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALLQAGAGVK
GEFENRLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALARGELRTIA
ATTWAEYKKYVERDPALARRFQVVKVEEPSEDVAIDMLRGMVETLEKHHGVEIVDDAVRE
AVKLSHRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESELRVLRHE
AATGGDHQEAIVALSARLDTLRQKHKRLSDKVDEEKHAVMEIVALRRKIADSLRSDAPPA
DEENEPALLTAALRRLEKGLEALQNDEPMVPVCVDGVMVAEVISGWTGIPVGKMMTDELH
TVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFMLVGPSGVGKTETAFA
LADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLD
EMEKAHPDVLELFFQVFDKGIMEDGEGVQIDFKNTLILLTSNAAQDVITQASQGGRRPDP
EELVDRLRPELLKQFSPAFLGRLALVPYHHLGDEQIRSIVNLKLGKLARRFALNHHTEFT
WDTQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVLERISMAAAFTAVHMGVSADG
AFSFGFEPATLS
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggacatcgacatccgcaccctgctcggccggctcaatccggagtgcaagcgcgccatg
gaacaggccgccgagctgtgcgtgcagcagacgcactacaacgtcgacatcgagcacctg
ctgatgaagctggtggacaacgaggcgcccgacctgcggctggtgttcggccgcttcggc
atccggcccgacacggtacaggcgcagctgcagaagtcgctcgacaccttcaagcgcggc
aacggccgcacgccgagcctggcgcccgacttcgcgccgctcttccaggaagcctggctc
atgagctcgatgctgctgggccagcagcacgtgcgctcgggcacgctgatgctggcgctg
ctcgaagtcgaccgcctgcgcggccggctggtcgacgccgcgcccgcgctgctgcagatt
ccgcgcggctcgctgcgcgacgagctggccggcctgctgcagtcctcgccggaagacgcg
gcgggcgcggcactggccgcggcgccgatcgcaccggcgccttcagtccccgcggcgagc
cagcctgccgcgccgcaaccggctcctgaaacaggtgcgatgcagatgcccaccgcgcgc
cgcagcagctcggccacgccatcgctcgaccagtacacggtcgacatgacgcagctcgcg
cgcgacggcgccatcgaccccatccgcggccgcgacggcgagatccgccagatcatcgac
gtgctgctgcgccgccgccagaacaaccccatcctcaccggcgaggccggcgtgggcaag
acagccgtggtcgaaggcttcgcgcagcgcgtggtgcagggcgacgtgccgcccgcgctg
cgccaggtgtctgtgcgttcgctcgacctcgcgctgctgcaggccggtgcaggcgtgaag
ggcgagttcgagaaccggctcaagtcggtcatcgccgaggtcaaggcctcgcccacgccg
gtgatcctgttcatcgacgaggcgcaccagctcatcggagcgggcggcgccgagggccag
ggcgacgcggccaacctgctcaagccggcactggcgcgcggcgagctgcgcaccatcgcc
gccaccacctgggccgagtacaagaaatacgtggagcgcgacccggcgctggcgcggcgc
ttccaggtcgtgaaggtcgaggagccgagcgaggacgtcgccatcgacatgctgcgcggc
atggtcgagacgctggagaagcaccacggcgtggagatcgtcgacgacgcggtgcgcgag
gccgtgaagctctcgcaccgctacatcaccggccgccagctgcccgacaaggccatcagc
gtgctcgacacagcctgcgcgcgcgtggccatcgggcagaacgggctgccggccgaactc
gaatcggccgcgcgcgacatcgccacgggcgagagcgaactgcgcgtgctgcgccacgaa
gcggccacgggcggcgaccaccaggaagccatcgtggccctttccgcgcggctcgacacg
ctgcgccagaagcacaagcgcctgtccgacaaggtcgacgaggaaaagcacgcggtgatg
gagatcgtcgctctgcgccggaagatcgccgacagcctgcgaagcgacgcaccgccggcc
gacgaggagaacgagcccgccctgctcaccgccgcgctgcgccggctggagaaaggcctg
gaggcgctgcagaacgacgagcccatggtgccggtgtgcgtcgatggcgtgatggtggcc
gaagtcatctccggctggaccggcatcccggtcggcaagatgatgaccgacgagcttcac
acggtgctcaacctgaaggagaagctcgccgagcgcgtggtcggccaggacgacgcactc
gacgccatcgcgcggcgcgtgcgcaccttccgtgccgatctcgatgaccccggcaagccg
gtgggcgtgttcatgctggtgggcccgagcggcgtgggcaagaccgagaccgccttcgcg
ctggccgacctgctgtacggcggcgagcgcaacgtcatcacggtgaacatgtcggagttc
caggaggcccacaccgtctccagcctcaagggcgcgccgcccggctatgtgggctacgga
cgcggcggcgtgctgacagaagccgtgcgccgccgcccctacagcgtggtgctgctcgac
gagatggagaaggcgcaccccgacgtgctggagctcttcttccaggtgttcgacaagggc
atcatggaagacggcgaaggcgtgcagatcgatttcaagaacacgctgatcctgctgacc
tccaacgccgcgcaggacgtgatcacgcaggcctcgcagggcgggcgccggcccgacccc
gaggaactggtggaccgcctgcgccccgagctgctcaagcagttcagccccgccttcctc
ggccggctggcgctggtgccctaccaccacctcggcgacgaacagatccgttccatcgtc
aacctcaagctcggcaagctggcgcggcgcttcgcgctgaaccaccacaccgagttcacc
tgggacacgcaggtggaagacgccatcaccgcgcgctgcaccgaggtggacagcggcgcc
cgcaacatcgaccacatcctggcccacgcggtgctgcccgagctctcgcgccaggtgctg
gagcgcatctcgatggccgccgccttcaccgcggtgcatatgggcgtgagcgccgacggt
gccttctccttcggcttcgagccggccacgctgagctga

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