Variovorax sp. W6: SFB74_11370
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Entry
SFB74_11370 CDS
T11181
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
vaw Variovorax sp. W6
Pathway
vaw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFB74_11370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_11370
Transporters [BR:
vaw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SFB74_11370
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Proton_antipo_N
Motif
Other DBs
NCBI-ProteinID:
XVK61117
LinkDB
All DBs
Position
2567301..2570597
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AA seq
1098 aa
AA seq
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MNLSLPFVRRPIGTVLLTIGVALAGIAAFFVLPVSPLPQVDYPVISVRAAIPGASPETMA
TSVATPLERHLGTIAGVNEMTSTSSVGSTRVTLQFDLSRNIDGAAREVQAAINASRIDLP
ATLRSNPTYRKANPAASPVIILALTSKTKTPGQIYDAVSNIVSQRLSQVDGVGDVEIGGG
SLPAVRIELLPFALNRYGISTEDVRAAIQASNANRPKGMVQGDGRKLQIYTQTPALRASD
YAPMVIAWRNGAAVRLQDVAEVVDGVEDTRTLGLFNGEPAIIVLITRQPSANIIETVDSV
RALLPELQAQLPPDVTLQVASDSTNSIRGSLREVELTLVISVILVVLVVSLFLRSVRATI
VPAVATVAALLGTFGVMYLLGFSLNNLSLMALTVATGFVVDDAIVVLENTSRHIESGMTR
MKAALLGAKEVGFTVLSISVSLVAVFIPLLFMGGQVGRLFREFAVTLSAAVLISLVISLT
TTPMMCAWLLKPGGEHDKNKPQGRMGRMAARSYDWVLRQYERSLDWALDSKALVMLILVA
VIGLNVYLFSAAPKGFFPQQDSGQLNGGLRADQSISSQALAAKLRQVVDIIRKDEAVDTV
VGFTGAGRAGGGFMFVNLKPANQRKDSGLAVIARLRPQLNQVTGLRVFLGTVQDVRSGGR
ASNSTYQYTLKSDNVADLRNWAVKLADELKMQPVLTDIDTDQDQNGVETVAKVDPDSARR
LGLTSTAIDNALYNAFGQRQVATIYTELNQYHVVMEWAQRYTRSPNSLSDVYVPATKTSV
VGGQTVTTQVAASSTATGSSSSSSGSSSSSSSSSSSAATATVPVSANAALRNASTGNVLS
NTATALVPLSAVAKFEEQSVATSVSHEDGELATTISFNLAEGANLGDAREAIAKAEANIA
MPTNVRGAFAGTAASAQQSQGQQAMLILAALIVIYIVLGILYESLVHPITVLSTLPSAGV
GAVLALLMFRMEFSIIALIGVFLLIGIVKKNAILIIDFALEAERSRGLTPLEAVREACLL
RFRPILMTTMAAALGALPLAIGFGEGAELRRPLGVAIIGGLIASQLLTLLTTPVVYLLLD
KLRRRSANEHQLSRATAA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtcgctccccttcgtccgccgccccataggcacagtgctactgaccataggc
gtagccctggccggcatagccgccttcttcgtcctcccggtctccccactcccccaggtc
gactaccccgtcatctcggtaagagcagcaatccccggcgccagcccggaaacgatggcc
accagcgtagccaccccgctggagcgccacctgggaacaatcgcaggcgtcaacgaaatg
acgtccaccagctcggtaggctccacccgcgtcacgctgcagttcgacctgagccgcaac
atcgacggcgcagcaagagaagtgcaggccgcgatcaacgcgagccgcatcgacctgccc
gccacgctgcgcagcaatccgacctaccgcaaggccaacccggcggcgtcgccggtgatc
atcctggcgctcacgtcgaagaccaagacgccgggccagatctacgacgcggtgtcgaac
atcgtcagccagcgcctgtcgcaggtggacggggtgggcgacgtggagatcggcgggggc
tcgctgccggcggtgcgcatcgagctgctgccgttcgcgctcaaccgctacggcatcagc
accgaggacgtgcgcgccgccatccaggcctcgaacgccaaccggcccaagggcatggtg
cagggcgacgggcgcaagctgcagatctacacgcagacgccggcgctgcgcgcgagcgac
tacgcgccgatggtcatcgcctggcgcaacggcgcggcggtgcggctgcaggacgtggcg
gaggtggtcgacggcgtggaggacacgcgcacgctgggcctcttcaacggcgagccggcg
atcatcgtgctgatcacgcggcagccctcggccaacatcatcgagaccgtcgacagcgtg
cgggcgctgctgcccgagctgcaggcgcagctgccgccggacgtgacgctgcaggtggcg
tcggacagtaccaactccatccgcggctcgctgcgcgaggtggagctcacgctggtcatt
tccgtcatcctggtggtgctggtggtgagcctgttcctgcgcagcgtgcgcgcgacgatc
gtgccggcggtggcgacggtggcggcgctgctgggcaccttcggggtgatgtacctgctg
ggcttcagcctcaacaacctgagcctgatggcgctcacggtggccaccggcttcgtggtg
gacgacgccatcgtggtgctggagaacacgagccggcacatcgaatccggcatgacgcgc
atgaaggcggcgctgctgggcgcgaaggaagtgggcttcacggtgctgtcgatcagcgtg
tcgctggtggcggtgttcattccgctgctgttcatgggcgggcaggtggggcggctgttc
cgcgagttcgcggtcacgctttcggcggcggtgctgatctcgctggtcatctcgctgacc
accacgccgatgatgtgcgcctggctgctcaagcccggcggcgaacacgacaagaacaag
ccgcaagggcgcatgggccgcatggccgcgcgcagctacgactgggtgctcaggcagtac
gagcgcagcctcgactgggcgctggacagcaaggcgctggtcatgctcattctggtggcg
gtgatcgggctcaacgtgtatctcttcagcgcggcgcccaagggcttcttcccgcagcag
gacagcggccagctcaacggcggcctgcgcgccgaccagagcatctcgtcgcaggcgctg
gcggccaagctgcggcaggtggtcgacatcatccgcaaggacgaggcggtcgacaccgtg
gtgggcttcaccggcgccggccgggcagggggcggcttcatgttcgtcaacctgaagcct
gcgaaccagcgcaaggacagcgggctggccgtgatcgcgcggctgcggccgcagctcaac
caggtgaccggcctgcgcgtgttcctgggcacggtgcaggacgtgcgctcgggcggccgc
gccagcaactcgacctaccagtacacgctcaagagcgacaacgtcgccgacctgcgcaac
tgggccgtgaagctggccgacgaactgaagatgcagccggtgctgaccgacatcgacacc
gaccaggaccagaacggcgtggaaacggtggccaaggtcgaccccgacagcgcgcgccgg
ctgggactgacttccacggccatcgacaacgcgctctacaacgccttcggccagcggcag
gtggcgaccatctacaccgagctgaaccagtaccacgtggtgatggaatgggcacagcgc
tacacgcgcagcccgaattcgctgagcgacgtgtatgtgccggccaccaagacttcggtg
gtgggggggcagaccgtgaccacgcaggtggcggcgagcagcacggcgacggggtcttct
tcgtcctcgtccgggtcctcttcgtcatcgtcatcgtcatcgtcctcggccgccacggcc
accgtgccggtgtcggccaacgcggccctgcgcaatgcctcgacgggcaacgtgctgagc
aacaccgccaccgcgctggtgccgctgtcggcggtcgcgaagttcgaggagcagtcggtg
gccacctcggtgagccacgaagacggcgagctggccacgaccatctcgttcaacctcgcc
gaaggcgccaacctgggcgacgcgcgcgaggccatcgccaaggccgaggccaacatcgcc
atgcccaccaacgtgcgcggcgcgttcgcgggcacggcggcgagcgcgcagcagtcgcag
ggccagcaggcaatgctgatcctggcggcgctgatcgtgatctacatcgtgctgggcatc
ctgtacgagagcctggtgcacccgatcacggtgctgtcgacgctgccatcggccggcgtg
ggcgcggtgctggcgctgctgatgttccgcatggagttttccatcatcgcgctgatcggc
gtgttcctgctgatcggcatcgtgaagaagaacgccatcctgatcatcgacttcgcgctg
gaggccgagcgctcgcgcgggctcacgccgctggaggcggtgcgcgaggcctgcctgctg
cgcttccggccgatcctgatgacgaccatggcggccgcgctcggcgcgctgccgctggcc
atcggcttcggcgagggcgccgaactgcgccggccgctgggcgtggccatcatcggcggc
ctgatcgcgagtcagctgctgaccctgctgacgacgccggtggtgtacctgctgctcgac
aagctgcgccgccgcagcgccaacgaacaccagctgagccgcgcgacggcagcctga
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