Variovorax sp. W6: SFB74_12685
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Entry
SFB74_12685 CDS
T11181
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00541
Biosynthesis of various nucleotide sugars
vaw01100
Metabolic pathways
vaw01250
Biosynthesis of nucleotide sugars
Module
vaw_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SFB74_12685 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vaw01005
]
SFB74_12685 (kdsA)
Enzymes [BR:
vaw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SFB74_12685 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vaw01005
]
Lipid A
SFB74_12685 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
XVK61365
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Position
complement(2847865..2848710)
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AA seq
281 aa
AA seq
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MSTVTITPQVATSNEAPFVLFGGVNVLESKDLAMRSAEEYVRVTRKLGIPYVFKGSFDKA
NRSSIHSYRGPGLDEGLKILQAVKDGFGVPVLTDVHEIAQADPVAEVVDVLQLPAFLARQ
TDLVVALARTGRVINIKKPQFLSPSQMLNIVEKFKEAGNDKLILCDRGTCFGYDNLVVDM
LGFGVMKKVSQNLPIIFDVTHALQQRESGAAASGGRREQVADLARAGMAVGLAGLFLEAH
PDPAQAKCDGPSALPLDRLEPFLTQIKALDDLVKSFPPLKI
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaccgtcaccatcaccccccaagtcgccaccagcaacgaggcccccttcgtcctc
ttcggcggcgtcaacgtcctcgagtcgaaggacctcgccatgcgcagcgccgaggaatac
gtgcgcgtcacgcggaagctgggcattccctacgtgttcaagggaagcttcgacaaggcc
aaccggtcttccatccactcctaccgcggtcccgggctggacgaaggcctgaagatcctg
caggccgtgaaggacggcttcggcgtgccggtgctcaccgacgtgcacgagatcgcccag
gccgatccggtggccgaagtggtcgacgtgctccagctgcccgccttcctggcgcgccag
accgacctggtggtggcgctggccaggaccggccgggtgatcaacatcaagaagccccag
ttcctgagcccctcgcagatgctcaacatcgtcgagaagttcaaggaagccggcaacgac
aagctcatcctgtgcgaccgtggcacctgcttcggctacgacaacctcgtggtggacatg
ctgggcttcggcgtgatgaagaaggtgtcgcagaacctgcccatcatcttcgacgtgacc
cacgcgctgcagcagcgcgaatcgggcgccgccgcgtcgggcgggcgccgcgagcaggtg
gccgacctggcgcgcgccggcatggcggtgggcctggcgggcctcttcctcgaagcccac
ccggacccggcccaggccaagtgcgacggcccgagcgccctgccgctggaccggctggag
cccttcctcacgcagatcaaggcgctggacgacctggtgaagtcgttcccgccgctgaag
atctga
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