Variovorax sp. W6: SFB74_13245
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Entry
SFB74_13245 CDS
T11181
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vaw Variovorax sp. W6
Pathway
vaw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFB74_13245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_13245
Transporters [BR:
vaw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SFB74_13245
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XVK61471
LinkDB
All DBs
Position
complement(2967932..2969548)
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AA seq
538 aa
AA seq
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MKKVPVPPSRPPSRRSCASRVAVIALGLAAAAPVLAQPTVGAGQTLRIQMNSDIRSTDPG
GNRDDNTDNVLLHVAEGLVALREDTSVGPMLASKVDTSADGLTYTFTLRDGVKFQNGATL
TADDVVWNWQRYLKPTGGWRCLPEFDGKGMTKVLSVEAPNPKTVVFKLERASALFLTMMA
RPDCGGAAILHRSSVGPDGQWKEPVGTGPYRLKEWKRGQYVELTRFDGYTSRAEPRDGLA
GGKKAEIENLRFVVIPDSAAAKAALYSGGIDAFVNPSPADVVEMRKRSDVLVDTTPVMSM
VALLLQTNDPVLKDVRIRRALALSLDTPEIARSVTEGLSPVNNSVVPSSSPYYDAAQGSG
FKRDIAAAKKLLAEAGYRNQPIRMIANKRYEALYSAAVLVQAMASEAGINIELEVLDWAT
QLDRYTKGQYQSMAFIYSARIDPSLNFEMVSGDKASQPRKVWDSAYGQSRLAESMVTRDK
ARRQVLFDEMHKQMLQDVPMIVLFNASDATAMRKSVTGFKGWAPAKPRFWNVRLAAAG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtccccgttcctccgtcccgcccgccctctcgtcggtcttgcgcatcgcga
gtcgccgtcatcgcgctgggtctggccgccgccgcgcccgtgctcgcccagcccaccgtg
ggcgcgggccagacgctgcgcatccagatgaactccgacatccgcagcaccgacccgggc
ggcaaccgcgacgacaacaccgacaacgtgctgctgcacgtggccgaagggctggtcgcg
ctgcgcgaggacacctcggtgggccccatgctcgcgagcaaggtcgacacctcggccgac
ggcctgacctacaccttcaccctgcgcgacggcgtgaagttccagaacggcgccacgctc
acggccgacgacgtggtgtggaactggcagcgctacctcaagcccaccggcggctggcgc
tgcctgcccgagttcgacggcaagggcatgaccaaggtgctctcggtggaggcgcccaat
ccgaagacggtggtgttcaagctggagcgcgcgagcgccctcttcctcacgatgatggcc
cggcccgactgcggcggcgccgccatcctgcatcgcagctcggtcgggcccgacggccag
tggaaggagccggtgggcaccggcccctacaggctcaaggaatggaagcgcggccagtac
gtggagctcacgcgcttcgacggctacacctcgcgcgccgaaccgcgcgacggcctcgcg
ggcggcaagaaggccgagatcgagaacctgcgcttcgtcgtcattcccgactcggccgcc
gccaaggccgcgctctatagcggcggcatcgacgcattcgtcaaccccagcccggccgac
gtggtcgagatgcgcaagcgctccgacgtgctggtcgacaccacgccggtgatgtcgatg
gtcgccctgctgctgcagaccaacgacccggtgctgaaggacgtgcgcatccgccgcgcg
ctggcgctctcgctcgacacgcccgagatcgcgcgctccgtcaccgagggcctctcgccg
gtcaacaactcggtggtgccttcttccagcccctactacgacgcggcgcagggcagcggc
ttcaagcgcgacatcgccgccgcgaagaagctgctggccgaggccggctaccgcaaccag
ccgatccgcatgatcgccaacaagcgctacgaggcgctgtactcggccgccgtgctggtg
caggccatggcctccgaggcgggcatcaacatcgagctggaggtgctcgactgggccacc
cagctcgaccgctacaccaagggccagtaccagagcatggccttcatctactcggcgcgc
atcgatccctcgctcaacttcgagatggtgtcgggcgacaaggccagccagccgcgcaag
gtctgggacagcgcctacggccagagcaggcttgccgaatcgatggtcacgcgcgacaag
gcgcgccgccaggtgctcttcgacgagatgcacaagcagatgctgcaggacgtgccgatg
atcgtgctcttcaacgccagtgacgccaccgccatgcgcaagagcgtgaccggcttcaag
ggctgggcgccggccaagccgaggttctggaacgtgcggctggccgccgcgggctga
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