Variovorax sp. W6: SFB74_13875
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Entry
SFB74_13875 CDS
T11181
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vaw03009
]
SFB74_13875
Enzymes [BR:
vaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SFB74_13875
Ribosome biogenesis [BR:
vaw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SFB74_13875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
XVK61594
LinkDB
All DBs
Position
3087601..3089415
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AA seq
604 aa
AA seq
DB search
MSTTDTEDAAMLPVEPEVKKKKRATPAKKAAAEAAEAVAAPEPEAPKKPRAPRKKKVVEP
AAAVEGESVAAPVAQVPETVVEAVVKPEAVASPVAEDVPVAAAEVARAPEPVQARQPEQA
ERIDDQEDEGQDEDEDDEEPDEEEDDLDRARRAAEREQRNAPPPEPIRFADVISGQFDAD
EESPEVPPLKRVLLPEADSPKLHKVLAQAGLGSRLEMEQLILQGRISVNNEPAHIGQRIQ
YGDQVKINGKPIRYRIAPPPPRVIAYHKPVGEVVTHDDPQNRPTVFRKLPRLQQGKWQSV
GRLDLNTEGLLLFSSSGDLANQLMHPRFGLEREYAVRVLGALTSEEKQKLLDGVRLDDGM
AQFGAIEDGGGEGSNCWYRVTISEGRNREVRRLFESVGHAVSRLIRIRYGAMVLPRGLKR
GAWMELDERDIRALFQASGGVAARPGQQQRGPGQEGGGGNGRGGRNKKRRGNRNGGGGGQ
QQPRDMRDARDDGGREAPIPNPLGDGRPARGERGGRANRGGSNGGGQAQGQGRRGNGSGN
RQGGDRQQGGGNQPDPMKTSLGYIGADSFSRQRKEQRGGGQRRGGGGGGGGGFGNQGGGR
RRGR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccgacaccgaagacgcagcaatgctgccggtcgagcccgaagtcaagaag
aagaaaagggcgaccccggccaagaaggctgcggccgaagctgctgaagcggtagcggcg
ccggagcccgaggcgccgaagaagccgcgtgcgccccgcaagaagaaggtggtcgagccg
gctgccgctgtcgaaggcgaatcggtggccgcgcctgttgcacaagtgcccgagacagtg
gtcgaggcagtggtcaagccggaagctgttgcttcccctgtcgccgaggacgttcccgtt
gctgccgcagaggtggcgcgcgctcctgagcctgtccaggcgcgccagccggaacaggcc
gaacgcatcgacgatcaagaggatgaaggtcaggacgaagacgaggacgacgaagagccc
gacgaggaagaggacgacctcgaccgcgcccgccgcgccgccgagcgcgagcagcgcaac
gctccgccgcccgagccgatccgcttcgcggacgtcatctccggccagttcgatgccgac
gaggaaagccccgaagtcccgccgctcaagcgcgtgctgctgccggaggccgattcgccc
aagctgcacaaggtgctggcgcaggccggcctcggttcgcggctcgaaatggagcagctg
atcctccagggccgtatttccgtcaacaacgagccggcccacatcggccagcgcatccag
tacggcgaccaggtcaagatcaacggcaagccgatccgctaccgcatcgcgcctccgccg
cctcgcgtgatcgcgtatcacaagccggtgggcgaggtggtcacgcacgacgacccgcag
aaccggccgaccgtgttccgcaagctgccgcgcctgcagcagggcaagtggcagtcggtg
ggtcgcctcgacctgaacaccgaggggctgctgctgttcagcagctccggcgatctggcc
aatcagctcatgcatccgcgcttcggcctggagcgcgagtacgccgtgcgcgtgctgggc
gcgctcaccagcgaagaaaagcagaagctgctcgacggcgtgcgccttgacgacggcatg
gctcagttcggcgccatcgaggacggcggcggcgaaggctccaactgctggtaccgcgtg
accatttccgaaggccgcaaccgcgaggtgcgccgcctgttcgagtcggtgggccatgcg
gtcagccggctgatccgcatccgctatggcgccatggtgcttccgcgcggcctgaagcgc
ggtgcctggatggagctcgacgagcgcgacatccgtgcgctgttccaggcttcgggtggc
gtggctgcccggccgggccagcagcagcgcggcccggggcaggaaggtggcggcggaaat
ggtcgtggcggtcgcaacaagaagcgccgcggcaaccgcaatggcggcggtggcggccag
cagcagccgcgcgacatgcgcgatgcacgcgacgacggcgggcgcgaggctccgatcccg
aatccgctgggcgacggccgtccggctcgtggcgagcggggagggcgcgccaaccgcggg
ggcagcaacggcggtggccaagcccaggggcagggacgtcgcggcaacggcagcggcaat
cgccagggcggagatcgccagcagggcggcggcaaccagcccgatccgatgaagacctcg
ctgggctacatcggcgccgacagcttctcgcgccagcgcaaggagcagcgcgggggaggc
cagcgccgcggtggtggcggaggcggcggtggcggcttcggcaaccagggcggcggacgt
cgccgcgggcgctga
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