Variovorax sp. W6: SFB74_14545
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Entry
SFB74_14545 CDS
T11181
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaw03400
]
SFB74_14545
Enzymes [BR:
vaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFB74_14545
DNA repair and recombination proteins [BR:
vaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SFB74_14545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
XVK61722
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Position
3206153..3208750
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AA seq
865 aa
AA seq
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MNEGHPVQALWCDPADGVVARIVRALAERQLHAARTVVLVPYAQLMGVARAMWARCGSPG
FVPRFETTHNWARSAGGFVPTGYDIAHDMARDLVTAQALLSQAGFHAERFALAGRVVELA
YQLAPLAAAATPEARGGEWAERAASVADASSESEWFRIESALIRIAVAWTSTSGYATDVL
QRESTRAQVDALIVLEGFQADPLTQSLCKLWGEHALHVSLVPSGPPAQTCASHVALDPED
EAELAAACVLRHLAEGRAPVALVATDRALTRRISAQLSAQGVVTHDETGWKLSTTRAAAT
LMSALRACAHDATSDQVLEWLKSGADGDSPIVQSLEARLRQEAMRDWSTWCALMTRSEKS
KDTALLVFTEAIEARRAPMARSRPLAEWLRALRELLEASGQWTLLDEDLAGGKVIGALWL
DAGAHGDDEDEFPGGRHTLAEFTAWVRDVLEDASFVPPAGDQAPRVVVLPLYQLLGRSFG
AVVVPGCDDRRLPASPEPPGNWSAAQRLELGLPSREALEAAQRAAWAAALHNPSCELVWR
HSDASGEPVRPSPLVQALQLDHALQPSADPRTPREVAVKPTGYPTPSGALLPLQNISTSV
YEDLRRCPYRFFALRQLGLRSADELDAEVDKRDFGNWLHAVLGHFHEALAEAPTPDAQER
IALIEEAARRSTQELGLSDAEFLPFAAAWPAVRDGYLAWLRGHEAAGAVFAESEPWKEQS
LGDLRLIGRLDRIDRMPDGQAFVIDYKTESATVSKERVKDPTEDTQLAFYAALVADDTLR
AAYVNVGEKAAGTQTVEQPAVVEARDALVTGIIDDFRRISQGAALPPLGEGAVCDYCAAR
GLCRKDFWDEASPPPGVEATGGDTQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaggccaccccgtgcaggccctgtggtgcgatccagccgacggcgtcgtcgcg
cggatcgtccgcgcgctcgccgagcgccagctgcatgccgcccgcaccgtggtgctggtg
ccgtacgcgcagctgatgggcgtggcgcgcgccatgtgggcgcgctgcggcagcccgggc
ttcgtgccgcgcttcgaaaccacccacaactgggctcgcagtgcgggaggcttcgtgccg
acgggctacgacatcgcccacgacatggcgcgcgatctggtcacggcgcaggccctgctg
tcgcaggcgggcttccatgccgagcgttttgccctggccggccgcgtcgtcgaactggcc
tatcagctcgcgcccctggcggccgcggcaacgcctgaagcgcggggcggcgaatgggcc
gagcgcgcggcgagcgtggccgatgcgagcagcgagtcggaatggtttcgcatcgaaagc
gcgctgatccgcatcgcggtggcgtggacctcgacctcgggctatgccaccgacgtgctg
cagcgcgaatccacgcgtgcccaggtcgatgcgctgatcgtgctcgagggcttccaggcc
gatccgctcacccagtcgctgtgcaagctgtggggcgagcatgcccttcatgtttcgctc
gtgccttcggggcctcccgcgcagacctgtgcctcgcacgtcgccctggaccccgaggac
gaggccgagctggccgccgcctgcgtgctgcgccatctcgccgaaggccgtgcccccgtc
gccttggtggcgaccgatcgcgcgctcacccgccgcatcagcgcccagctgagcgcacag
ggcgtcgtcacgcacgacgaaacaggctggaagctctcgaccacgcgcgccgccgcaacg
ctgatgagcgcgctgcgcgcctgcgcccacgacgccaccagcgaccaggtgctcgaatgg
ctcaagagcggcgccgacggcgattcgcccatcgtccagtcgctcgaagcccgcctgcgt
caggaggccatgcgcgactggtcgacctggtgcgcgctgatgacccgcagcgagaagtcc
aaggacaccgcgttgctcgtcttcaccgaagccatcgaggcgcgccgcgccccgatggcc
cgctcgcgccccttggccgagtggctgcgcgccctgcgagaactgctggaggccagcggc
cagtggaccctgctcgacgaagacctggccggcggcaaggtgatcggtgcgctgtggctc
gatgctggcgcccatggcgacgacgaggacgagttccccggcggtcgccacaccctggcc
gaattcaccgcctgggtccgcgacgtgctggaagacgcgagcttcgtgccccccgcgggc
gaccaggccccgcgcgtcgtcgtgctgccgctctaccagctgctgggccggtccttcggc
gccgtggtcgtcccgggctgcgacgaccgtcgcctgcccgcgtcgcccgagccgcccggc
aactggagcgccgcgcagcgcctcgaactgggcctgccgtcgcgcgaagcgctcgaagcg
gcccagcgcgcagcctgggccgcagccttgcacaacccgtcgtgcgaactggtctggcgc
cattccgacgccagcggcgagccggtgcggccgagcccgctcgttcaggcgctgcagctc
gaccacgcgcttcagccctcggccgacccgcgcacgccgcgcgaggtggccgtgaagccg
accggatacccgacgccctcgggtgcgctcctgccgctgcagaacatctccaccagcgtc
tacgaagacctgcgccgctgtccctaccgcttcttcgcattgcgccaactgggcctgcgc
agcgccgacgaactcgatgccgaggtcgacaagcgcgacttcggcaactggctgcatgcc
gtgctcggccacttccacgaggcgctggccgaggccccgacgccggacgcgcaggagcgc
atcgccctcatcgaggaggctgcccggcgctcgacgcaggagctggggctgtccgacgcc
gaattcctgcctttcgccgccgcatggcccgcggtgcgggacggctatctggcctggctg
agggggcacgaggctgccggcgccgtcttcgccgagtccgaaccgtggaaggagcagtcg
ctgggcgatctgcgcctcatcggccggctcgaccgcatcgaccgcatgcccgacggccag
gctttcgtgatcgactacaagaccgagtccgccaccgtcagcaaggagcgcgtgaaggac
cccaccgaagacacgcagctggctttctacgccgcgcttgtggccgacgacaccttgcgc
gccgcctacgtgaacgtgggcgagaaggccgccggcacgcagaccgtcgagcagcccgcc
gtggtcgaggcgcgcgacgcgctggtgaccggcatcatcgacgacttcaggcgcatctcg
cagggcgcggcgctgccgccgctgggcgaaggcgccgtctgcgactactgcgccgcgcgc
ggcctgtgccgcaaggacttctgggacgaggcgtcgccgcccccgggtgtcgaagccacc
ggaggcgatacacaatga
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