Variovorax sp. W6: SFB74_14565
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Entry
SFB74_14565 CDS
T11181
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vaw Variovorax sp. W6
Pathway
vaw03030
DNA replication
vaw03430
Mismatch repair
vaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SFB74_14565 (dnaX)
03430 Mismatch repair
SFB74_14565 (dnaX)
03440 Homologous recombination
SFB74_14565 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaw03032
]
SFB74_14565 (dnaX)
03400 DNA repair and recombination proteins [BR:
vaw03400
]
SFB74_14565 (dnaX)
Enzymes [BR:
vaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SFB74_14565 (dnaX)
DNA replication proteins [BR:
vaw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SFB74_14565 (dnaX)
DNA repair and recombination proteins [BR:
vaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SFB74_14565 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_30
AAA_14
Rad17
AAA_5
AAA_19
nSTAND3
SKI
AAA_assoc_2
AAA_2
TsaE
Herpes_Helicase
AAA_28
Torsin
AAA_16
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
XVK61725
LinkDB
All DBs
Position
3213525..3215393
Genome browser
AA seq
622 aa
AA seq
DB search
MSYLVLARKFRPKTFGEMVGQGHVVQALENALTTQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGPDGQGGITATPCGVCQACRDIDAGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVLEHLTAVLQTESVPAEPQALRLLARAARGSMRDALSLTDQAIAFGNGELVEA
GVRQMLGSVDRGHVFRLIEALAQGDGKTVVETSEALRVDGMSAASTLEEMTAVLQAMAVL
QAVPSRAEAADAATDPDAADTARLAALMPADETQLLYSLCLHGRGELGLAPDEYAALTMV
LLRLLAFKPSSAAASTVSPEKKTLNEAAAAAPQAPVHAVPPAPAPAPVVRPPVEAPAAAV
RAPAPAPVVQAAAPVPAGHRLAVVDEPRQAEPRPDGAGDAPAKVVGVPIRVQPPPSARDT
PRPDEPRSTFTPIPTSEDGDFWYATVTQLVAAEAITALARELALQSQLVGRDTDQWLLRI
ERETLNQPSAREKLTVALNGAGHNVKLAIEVGGVVDSPARRNKQAADERQRLAEEAIMSD
PEVQALMRDFDAKIVPGTLKPA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctcgtgctcgcccgcaagttccgcccgaaaaccttcggtgagatggtcggc
caggggcatgtggtccaggcgctcgagaacgcgttgacgacgcagcgcctgcaccatgca
tacctcttcaccggcacccggggtgtcggcaagaccacggtctcgcgcattcttgcgaag
tcgctcaattgccaggggccggacgggcagggcggcatcacggccacgccgtgcggtgtc
tgccaggcctgccgcgacatcgacgcgggccgcttcgtcgactacaccgagctcgacgcg
gcctccaaccgtggcgtggacgaagttcagtcgctgctcgagcaggcggtctacaagccg
gttcaggggcgcttcaaggtcttcatgatcgacgaagtgcacatgctgaccaacaccgcg
ttcaacgcgatgctgaagacgctcgaggagccgcccgaatacctcaagttcgtgctggcc
acgaccgacccgcagaaggtgccggtcacggtgctgtcgcgctgcctgcagttcaacctg
cggccgatggcgcccgagacggtgctcgaacacctcaccgccgtgctccagaccgagagc
gtgccggccgagccgcaggcactgcgcctgctggcgcgcgctgcgcgcggctcgatgcgc
gacgcgctctcgctcaccgaccaggccattgcattcggcaacggcgagctggtggaagcc
ggcgtgcgccagatgctcggcagcgtcgatcgtggccatgtgttccgcttgatcgaggcg
ctggcgcaaggcgacggcaagacggtggtcgagacgtcggaggcgctgcgcgtcgatggc
atgtccgccgcttccacgctggaggaaatgacggccgtgctgcaggccatggcggtcttg
caggcagtgccttcgcgtgcggaagcggctgatgccgccaccgaccccgacgccgccgat
accgcgcgcctcgccgcgctgatgccggccgacgaaacccagttgctctacagcctgtgc
cttcatgggcgtggcgagctgggactggcacccgacgagtacgccgcgctgaccatggtg
ctgttgcggttgctggccttcaagccttccagcgcagccgcttcgacggtctccccggaa
aaaaaaactctgaatgaagctgcggctgcggcgccgcaggctccggtgcacgcggttccg
cctgctccggctcccgcgccagtcgttcggccgccggtcgaagcgcccgctgcggctgta
cgggctccggctccggcacctgtggttcaagccgccgcgccggttcctgcaggccaccgc
cttgccgtggtcgacgaaccccggcaggccgagcctcgtcccgacggcgccggcgatgcc
cccgccaaggtcgtcggcgtgccgatccgcgtgcagccgccgccgagcgcgcgcgatacc
ccgcgccctgacgagccccgcagcaccttcacgccgattccgaccagcgaggacggcgac
ttctggtacgccacggtcacgcagctggttgctgccgaggccattactgcactggcgcgc
gagctcgccctgcagtcgcagctggtgggccgcgacaccgaccagtggctgctgcgcatc
gaacgcgagacgctcaaccagccgtccgcccgcgagaagctcaccgtcgcgctcaacggc
gcgggccacaacgtcaagctcgccatcgaggtcggcggcgtggtcgatagccccgcgcgc
cgcaacaagcaggcggccgacgagcgccagcgcctggccgaggaagccatcatgagcgac
cccgaggtacaggcgctgatgcgcgatttcgacgcgaagatcgtccccggcacgctcaag
ccggcctga
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