Variovorax sp. W6: SFB74_15850
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Entry
SFB74_15850 CDS
T11181
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaw03016
]
SFB74_15850 (truB)
Enzymes [BR:
vaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SFB74_15850 (truB)
Transfer RNA biogenesis [BR:
vaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SFB74_15850 (truB)
Prokaryotic type
SFB74_15850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XVK61970
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All DBs
Position
3478918..3479874
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AA seq
318 aa
AA seq
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MNAPRTRVQRRPVHGVLLLDKPLGFSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDADKTYEATARLGVKTATGDAEGEVISERPVQVTPEDLARVEAQFTGP
IRQIPPMHSALKKDGKALYEYAREGVEVERAPRDVVIHKLEVRAIGEDTIRILASVSKGT
YIRTLGEDIGEALGCGAHLTSLRRIATGGFVEAQCVTIEALEAMDEEARLARLLPAEALV
GGHSRVTLGTEDAARFLSGLRRRGAWADADEVAVFGTEPQAFLGTAHVTAGELIPGRLLN
PIEIQQILLNAQQTEATP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccacgcacaagggtgcagcggcgccctgtgcatggggtgttgttgctcgac
aagccgctggggttctccagcaaccaggccttgcagaaggccaagtggttgctgcgcgcc
gaaaaggcgggccacaccggcacgctcgatccgctggccaccggcgtcctgccgctttgc
ttcggcgccgccaccaagttcagccagctccacctggatgccgacaagacctacgaggcc
acggcccgcctgggcgtgaagacggccaccggcgatgccgagggcgaggtgatttccgag
cgacctgtgcaagtcacgcctgaagacctggcgcgcgtcgaggcgcagttcaccggcccg
atccgccagatccctccgatgcacagcgcgctcaagaaggacggcaaggccctgtacgag
tacgcgcgggaaggcgtggaggtcgaacgggctccgcgcgacgtggtgatccacaagctc
gaagtccgcgcgatcggcgaagacaccatccgcatccttgcctccgtgagcaagggcacc
tacatccgcaccctcggcgaggacatcggcgaggcgctcggctgcggcgcgcacctgacc
tcgctgcgtcgcatcgccaccggcggcttcgtcgaggcgcagtgcgtcacgatcgaggct
ctggaggccatggacgaggaagcgcgcctggcgcggctgctgccggccgaggcgctcgtg
ggcggccacagccgcgtcacgctgggcacggaagatgcggcacgctttctttcgggcctg
cgccgccgcggtgcctgggccgatgccgacgaggtggccgtgttcggcaccgagccgcag
gcgttcctgggcacggcccatgtgactgccggcgaactgattccggggcgcttgctgaac
cccatcgaaatccagcaaattcttttgaacgcacaacagaccgaagcgacaccatga
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