Variovorax sp. W6: SFB74_17565
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Entry
SFB74_17565 CDS
T11181
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00020
Citrate cycle (TCA cycle)
vaw00480
Glutathione metabolism
vaw00720
Other carbon fixation pathways
vaw01100
Metabolic pathways
vaw01110
Biosynthesis of secondary metabolites
vaw01120
Microbial metabolism in diverse environments
vaw01200
Carbon metabolism
vaw01210
2-Oxocarboxylic acid metabolism
vaw01230
Biosynthesis of amino acids
vaw04146
Peroxisome
Module
vaw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vaw_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SFB74_17565 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
SFB74_17565 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SFB74_17565 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SFB74_17565 (icd)
Enzymes [BR:
vaw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SFB74_17565 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
XVK55947
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Position
complement(3869244..3870503)
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AA seq
419 aa
AA seq
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MTSYQHIKVPTEGQKITVNADNSLNVPDQPIIPFIEGDGTGLDITPVMLKVVDAAVAKAY
GGKKKIHWMEVYAGEKSTKVYGPDVWLPEETLHAVRDYVVSIKGPLTTPVGGGIRSLNVA
LRQELDLYVCLRPIQYFEGVPSPVREPHKTNMVIFRENSEDIYAGIEFEAESDKARKLIK
FLQDEMGVKKIRFPNTSGIGVKPVSREGTERLVRKALQYAIDNDKPSVTLVHKGNIMKFT
EGGFRDWGYGLAAKEFGAELIDGGPWMKFKNPRTGKEITVKDSIADAFLQQILLRPAEYS
VIATLNLNGDYVSDALAAQVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDYVNPGSEI
LSAEMMLRHMGWKEAADLIISSMEKSIASKKVTYDFARLMDGATQVSCSGFGQVMIDNM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttatcagcacatcaaagtcccgaccgaaggccagaagatcacggtcaacgcc
gacaactcgctcaatgtgcctgaccaaccgatcatccctttcatcgagggcgacggaacc
ggcctggacatcacgccggtgatgctgaaagtggtggacgctgcggttgccaaggcctac
ggcggcaagaagaagatccactggatggaggtctacgctggcgagaagtcgaccaaggtc
tatggccccgacgtctggcttcccgaggaaacgctgcacgccgtgcgcgactacgtggtt
tccatcaagggtccgctgaccacgcccgtcggcggcggcatccgttcgctgaacgtcgcg
ctgcgccaggaactcgatctctacgtgtgcctgcgtccgatccagtatttcgagggcgtt
ccgagcccggtgcgcgagccgcacaagaccaacatggtgatcttccgcgagaactcggaa
gacatctatgcaggcatcgaattcgaagccgagagcgacaaggccaggaagctcatcaag
ttcctgcaggacgaaatgggcgtcaagaagatccgctttcccaatacctcgggcatcggc
gtcaagccagtgtccagggaaggcacggagcgtctcgtgcgcaaggcgctgcagtacgcg
atcgacaacgacaagcccagcgttaccctggtgcacaagggcaacatcatgaagttcacc
gaaggtggcttccgtgactggggctacggcctggccgccaaggaattcggcgccgagctg
atcgacggcggtccgtggatgaagttcaagaacccgaggaccggcaaggaaattaccgtc
aaggacagcatcgccgatgcgttcctgcaacagatcctgctgcgtcccgcagagtacagc
gtgatcgccacgctcaacctcaatggcgactatgtgtccgacgccctggccgcgcaggtc
ggcggcatcggcatcgcccccggcgcgaacctgagcgataccgttgccatgttcgaggcg
acccacggcacggcccccaagtacgcaggcaaggactacgtgaaccctggttccgagatc
ctctccgccgaaatgatgctgcgccacatgggctggaaggaagccgccgacctgatcatc
agctcgatggaaaagtcgatcgccagcaagaaggtcacgtacgacttcgctcgcctgatg
gacggcgcgacgcaggtgagctgctcgggcttcggtcaggtcatgatcgacaacatgtaa
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