Variovorax sp. W6: SFB74_17725
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Entry
SFB74_17725 CDS
T11181
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00220
Arginine biosynthesis
vaw00240
Pyrimidine metabolism
vaw00250
Alanine, aspartate and glutamate metabolism
vaw01100
Metabolic pathways
vaw01110
Biosynthesis of secondary metabolites
vaw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SFB74_17725 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SFB74_17725 (carB)
00220 Arginine biosynthesis
SFB74_17725 (carB)
Enzymes [BR:
vaw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SFB74_17725 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
XVK55978
LinkDB
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Position
complement(3897211..3900459)
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AA seq
1082 aa
AA seq
DB search
MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGAATNKPV
ELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKNVGFPTVIRPSFT
LGGTGGGIAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDG
RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSID
YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGMNEKT
QDREVLEKELGEPGPERIWYVGDAFAQGMSVDEVFALTKIDPWFLVQIEEIVKIELELET
KSLDDIDAATLRLLKQKGFSDRRLAKQLRTTDTAIREKRRALGVRPVYKRVDTCAAEFAT
NTAYMYSTYEDECEADPSDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV
NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDREKPLGVIVQYGGQTPLKLALDLEANGV
PIIGTSPDMIDAAEDRERFQKLLHELKLLQPPNATARTEAEALEKATELGYPLVVRPSYV
LGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCLRDAEGQTLIGGV
MEHIEQAGVHSGDSACSLPPYSLSAETVTELKRQSAAMAAALNVVGLMNVQFAIQQKDGK
DVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQGITKEVTPPYFSVKEAV
FPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTHLPKSGKVFISVKNNDK
ARAVEVARGLAKLGFELIATKGTAAAINAAGIECATVNKVTEGRPHIVDMIKNNEIALVI
NTVEERRNAITDSRQIRTSALQARVTTFTTIFGAEAAVEGMGFMDELGVISVQEMHAQLA
TA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgcacagacctcaaatcgatcctcatcatcggcgccggcccgatcatcatc
ggccaggcctgcgagttcgactactccggcgtgcaggcctgcaaggcgctgcgcgaagag
ggctacaaggtcatcctgatcaacagcaaccccgcgacgatcatgaccgacccggccacg
gccgacgtcacctacatcgagcccatcacctggcagacggtcgagaagatcatcgccaag
gaacgccccgacgcgatcctgccgaccatgggcggccagaccgcgctgaactgcgcgctc
gacctctggcgcaacggcgtgctcgacaagtacacgggcgcagccaccaacaagcccgtc
gagctgatcggcgccacgcccgaggccatcgacaaggccgaagaccgcctgaagttcaag
gacgcgatgaccaagatcggactgggctcggcccgctccggcatcgcgcactcgatggac
gaggcctgggcggtgcagaagaacgtcggcttcccgaccgtgatccgccccagcttcacg
ctcggcggtaccggcggcggcattgcctacaacccggaagagttcgagaccatctgcaag
cgaggcatcgaagcctcgcccaccaacgagctgctgatcgaagaatcgctgctcggctgg
aaggagtacgagatggaagtcgtgcgcgacaaggccgacaactgcatcatcgtctgctcg
atcgaaaacctcgacccgatgggcgtgcacaccggcgactcgatcaccgtggcaccggcc
cagacgctctctgacaaggaataccagatcctgcgcaacgcctcgctggccgtgctgcgc
gagatcggcgtcgacaccggcggctcgaacgtgcagttctcgatcaacccgaaggacggc
cgcatggtcgtcatcgagatgaacccgcgcgtgtcgcgttcgtcggctctggcctccaag
gccacgggcttcccgatcgccaaggtcgcggccaagctggccgtgggctacacgctcgac
gagctgcgcaacgagatcaccggcggcgccacgccggcgtcgttcgagccctcgatcgac
tacgtggtcaccaagatcccgcgtttcgccttcgaaaaattcccgcaggccgattcgcgc
ctcaccacgcagatgaagtcggtgggcgaggtgatggccatgggccgcaccttccaggaa
tcgttccagaaggcgctgcgcggcctcgaagtcggcgtcgacggcatgaacgagaagacg
caggaccgcgaagtgctcgagaaggaactgggcgagcccggccccgagcgcatctggtac
gtgggcgatgccttcgcccagggcatgagcgtcgatgaagtgttcgcgctcacgaagatc
gacccgtggttcctggtgcagatcgaggagatcgtgaagatcgagctcgagctggaaacc
aagtcgctcgacgacatcgacgccgccacgctgcgcctgctgaagcagaagggcttctcc
gaccgccgcctggccaagcaactgcgcaccaccgacacggccatccgcgagaagcgccgt
gccctgggcgtgcgcccggtctacaagcgcgtggacacctgcgcggccgagttcgccacc
aacacggcctacatgtactcgacctatgaagacgagtgcgaggccgacccgagcgacaag
aagaagatcatggtgctcggcggcggtcccaaccgcatcggccagggcatcgagttcgac
tactgctgcgtgcacgccgcgctcgccatgcgcgaggacggctacgagaccatcatggtc
aactgcaaccccgagaccgtgtcgaccgactacgacacgtccgaccgcctgtacttcgag
ccgctgacgctcgaggacgtgctcgagatcgtcgaccgcgagaagccgctgggcgtgatc
gtgcagtacggcggccagacgccgctgaagctcgcgctcgacctcgaggccaacggagtg
ccgatcatcggcacctcgcccgacatgatcgacgcggccgaagaccgcgagcgcttccag
aagctgctgcatgaactcaagctgctgcagccgccgaacgccaccgcgcgcacagaggcc
gaggccctcgagaaggccaccgagctgggttacccgctggtggtgcgcccgagctacgtg
ctgggcggccgcgcgatggaaatcgtgcacgagcagcgcgacctcgagcgctacatgcgc
gaagccgtcaaggtcagcaacgactcgccggtgctgctcgaccgcttcctgaatgacgcc
gtcgaatgcgacgtcgactgcctgcgcgacgccgagggccagaccctcatcggcggcgtg
atggagcacatcgaacaggctggcgtgcactcgggcgactccgcctgctcgctgccgccc
tacagcctgagcgccgagacggtgaccgagctgaagcgccagagcgctgcgatggcggca
gcgctgaacgtggtcggcctgatgaacgtgcagttcgccatccagcagaaggacggcaag
gacgtcatctacgtgctcgaagtgaacccgcgtgcgtcgcgcacggtgccctacgtgagc
aaggccaccggcatccagctcgccaaggtggctgcacgctgcatggctggccagtcgctg
aagtcgcagggcatcacgaaggaagtgacgccgccgtacttcagcgtgaaggaagccgtg
ttcccgttcgtcaagttcccgggtgtggacaccatcctcggccccgagatgaagtcgacc
ggcgaggtgatgggagtgggcaagaccttcggcgaagccttcgtgaagtcgcaactgggc
gcgggcacgcacctgccgaagtcgggcaaggtcttcatctcggtgaagaacaacgacaag
gcgcgcgccgtcgaggtggcacgcggcctggccaagcttggcttcgagctgatcgccacc
aagggcacggctgccgccatcaacgccgcgggcatcgagtgcgcgacggtgaacaaggtg
accgaaggccgcccgcacatcgtggacatgatcaagaacaacgagattgcgctggtcatc
aacacggtggaagagcgccgcaacgccatcaccgattcgcgccagatccgcacctcggcc
ctgcaggctcgcgtgaccaccttcaccacgatcttcggcgcagaagccgcggtcgagggc
atgggcttcatggacgagctcggcgtgatctcggtgcaggaaatgcacgcgcaactggcc
acggcctga
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