Variovorax sp. W6: SFB74_18105
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Entry
SFB74_18105 CDS
T11181
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_18105
Transporters [BR:
vaw02000
]
Other transporters
Pores ion channels [TC:
1
]
SFB74_18105
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XVK56049
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Position
complement(3979422..3981338)
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AA seq
638 aa
AA seq
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MISHVCSFRGRAPARRFRHACLPLALVSAFGGLAHAQEASTLRETVVTANRTPQALSELV
GDVSIVDSNAIERSGATGVADLLSRLPGIEISRSGGVGNTTSLFIRGAETRFTAVYLDGA
RIDSQSTGGAGWEGIPLSQIDRIEVLRGPAAAVYGSDAVGGVIQLFTRRGEEGVSPYAGI
GFGSKGLRRIEGGVSGKSGLFDYSFGVAHEESKGYNVQPVSKRNVTKDGFTSPDRDGYNS
TSGNVKLGYQITPDQRIEATLLSSAVKAGYDTTVPSKTKLPILFANDISSNTLQTAGLTW
SAKWNNVYSTRVQVTDSQSVYKTQPSFYRTETKLRGYLFQNEFRFGPHLVTATLERREDA
LQNAPTTTSKLLSRDRSQDAISLGYSFVQGPHSLQLHVRHDKDSEFGGKTTGSAAYGYAI
TPSLRFTASAGTAFRVPTLYQRFSEYGLATLKPESSRNLELGLQYTEGATQLGIVAYANR
VQNLIVFDSSAKGCVSSIGCYASTARARYQGVTLSGSHRIGDVTLRGSFDFQDPRDLATH
NLLARRAQRHATMGADWRIAGWTLGAEVQTSSRRYDDAANGVKLGGYTVLNLSATTQITR
DINLVARVDNVGNKDYQFARLYANAGRTAYVGLKWTPH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccacgtttgctctttccgcggccgcgctcctgcgcgccgtttccgccacgcc
tgcctgccgctggcgctggtttccgccttcggcggcctggcccatgcgcaggaggcttcc
accctgcgcgagaccgtggtcacggccaaccgcacgccgcaggcgctgtccgagctcgtg
ggagacgtctccatcgtcgacagcaacgccatcgagcgcagcggcgcgaccggcgtggcc
gacctgctctcgcgcctgcccggcatcgagatctcgcgctcgggcggcgtgggcaacacc
accagtctcttcatccgcggtgccgagacacgcttcaccgccgtgtacctcgacggcgcg
cgcatcgactcgcaatcgaccggtggcgccggctgggaaggcattccgctctcgcagatc
gaccgcatcgaggtgctgcgcggcccggccgccgcggtgtacggctccgacgccgtgggc
ggcgtgatccagctcttcacccggcgcggcgaagagggcgtgtcgccctacgcgggcatc
ggcttcggcagcaaggggctgcgcaggatcgaaggcggcgtgagcggcaagtcgggcctc
ttcgactattcgttcggcgtcgcgcatgaagaaagcaagggctacaacgtgcagcccgtg
agcaagcgcaacgtgaccaaggacggcttcaccagccccgaccgcgacggctacaacagc
acctcgggcaacgtgaagctgggctaccagatcacgcccgaccagcgcatcgaggcgacg
ctgctgtccagcgccgtcaaggccggctacgacaccaccgtgccgtccaagaccaagctg
ccgatcctgttcgccaacgacatttcgagcaacacgctgcagaccgccggcctgacctgg
tcggccaagtggaacaacgtctacagcacccgcgtgcaggtgaccgactcgcagtcggtc
tacaagacgcagccttcgttctatcgcaccgagacgaagctgcgcggctacctgttccag
aacgaattccgcttcggcccgcacctcgtgaccgccacgctggagcgccgcgaggacgcc
ctgcagaacgcgcccaccaccacctcgaagctgctgtcgcgcgaccgctcgcaggacgcg
atttcgctcggctacagtttcgtgcagggcccgcactcgctgcagctgcatgtgcgccac
gacaaggacagcgagttcggcggcaagaccaccggcagcgcggcctatggctacgccatc
acgccatcgctgcgcttcaccgcatcggccggcaccgccttccgcgtgcccacgctgtac
cagcgtttcagcgaatacgggctggccacgctcaagcccgagtcgagccgcaacctcgag
ctgggcctgcagtacaccgagggcgcgacgcagttgggcatcgtggcctacgccaaccgc
gtgcagaacctgatcgtgttcgacagctcggccaagggctgcgtttcttccatcggttgc
tacgcgagcacggcccgcgcgcgctaccaaggtgtcacgctctcgggcagccatcgcatc
ggcgacgtcacgctgcgcggctccttcgacttccaggacccgcgcgaccttgccacccac
aacctgctcgcgcgacgcgcgcagcgccacgccaccatgggcgcagactggcgcatcgcc
ggctggacgctgggtgccgaggtgcagacctccagccgccgctacgacgatgcggccaac
ggcgtgaagctgggcggctacacggtgctgaacctgtcggccaccacccagatcacgcgc
gacatcaacctggtcgcgcgcgtcgacaatgtgggcaacaaggactaccagttcgcgcgg
ctgtacgccaatgccggccgcaccgcctacgtcggtctcaagtggacgcctcactaa
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