Variovorax sp. W6: SFB74_19880
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Entry
SFB74_19880 CDS
T11181
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00280
Valine, leucine and isoleucine degradation
vaw00650
Butanoate metabolism
vaw00907
Pinene, camphor and geraniol degradation
vaw01100
Metabolic pathways
vaw01120
Microbial metabolism in diverse environments
vaw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SFB74_19880
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SFB74_19880
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SFB74_19880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SFB74_19880
Enzymes [BR:
vaw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
SFB74_19880
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Motif
Pfam:
HMGL-like
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
XVK56389
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Position
complement(4364737..4365726)
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AA seq
329 aa
AA seq
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MKAGHGTRLFINEVATRDGFQMENRFIPTDDKIALVDRLSGLGYAKIEVTSFTSAKAIPA
LRDGEEVMQRIARRPGVVYTALVPNVRGAERALESRIDEFNVVMSASETHNLANLRMTRE
QSFAQLAEVIALAKQAGVPVNVSLSCVFGCPMEGEVPLAQVQGLIDRFAALEVQGITLCD
TTGMAYPTQVREVCEAVVSSQPAMEWTAHFHNTRGMGLVNTVAAVEAGIRRLDMSLGGIG
GCPYAPGATGNVATEDVVHMLQCMGYDTGMDLAGLVAAAGELGGLVEHDLPAQVSRAGHR
LTRHAPPPDFSDIAARARERGHAPKELQP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggccacggcacgaggctcttcatcaacgaggtcgccacgcgcgacggcttc
cagatggagaaccgcttcattcccaccgacgacaagatcgccctcgtcgacaggctgagc
gggctgggctacgcgaagatcgaggtcacgtccttcacctcggcgaaggcgatcccggcg
ctgcgcgacggcgaggaggtgatgcagcgcatcgcccgccgtcccggcgtggtctacacc
gcgctggtgccgaatgtgcgcggcgcggagcgtgcgctggaaagccgcatcgacgagttc
aacgtcgtcatgtcggcgagcgagacgcacaacctcgccaacctgcgcatgacgcgcgag
cagtcgttcgcacagctggccgaagtgatcgcgctggcgaagcaggccggcgtgccggtg
aacgtgtcgctgtcgtgcgtgttcggctgtccgatggagggcgaggtgccgctggcgcag
gtgcagggcttgatcgaccgattcgccgcgctggaagtgcagggcatcacgctgtgcgac
acgacgggcatggcttaccccacgcaggtgcgggaggtctgcgaggccgtcgtctccagc
cagccagcgatggaatggacagcccatttccacaacacgcgcggcatggggctggtgaac
acggtggccgcggtggaggctggcatccggcggctcgacatgtcgctgggcggcatcggc
ggatgcccctatgcgccgggcgcgaccggcaacgtggcgaccgaggacgtggtccacatg
ctgcagtgtatgggctatgacacgggcatggatctcgcgggcctggttgccgccgcaggg
gagctgggggggctggtcgagcacgatctgccggcacaggtctcgcgcgcgggccaccgg
ctgacgcggcatgcaccgccgccggatttcagcgacatcgcggctcgcgcccgggagcgc
gggcacgcaccgaaggagcttcaaccatga
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