Variovorax sp. W6: SFB74_19960
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Entry
SFB74_19960 CDS
T11181
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaw03000
]
SFB74_19960
Transcription factors [BR:
vaw03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFB74_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
AAA_2
HTH_8
AAA_5
Mg_chelatase
HTH_30
HTH_23
HTH_29
PAS_8
IclR_C
HTH_38
HTH_17
HTH_1
HTH_28
PAS
HTH_11
HTH_IclR
PAS_9
HTH_20
Sigma70_r4_2
HTH_22
AAA_16
HTH_7
Motif
Other DBs
NCBI-ProteinID:
XVK56405
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Position
4383463..4385340
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AA seq
625 aa
AA seq
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MSAEAQLPSIAVAQARELFFGQGRDPAPWIAPHISRSWQRSRPVDHQAVDPEPMALALLS
ERREQAMRLLNCAQPELDGLAEHAIGNGCVVILSDASGLILEEIGSADFLPKAQRIALQP
GVEWSEHNRGTNAIGTALAEREALMVLGGEHYLAQNGGLGCAAAPIFTGRGELAGALDIS
GETVRVNTHALGLVRMAAQQVEHRMMLAEAGGHVLRFHARPALIGTAREGLMVIEGGRIV
AANRVALELFGRSWKDLLDLDAEDFLGANWPRMEHRRGLLTLPGGRQIATVMERSNTPGA
ARPPQRRGVAQNVAEADDVQPLLHKAVRVLNEGVSVLVNGETGSGKEVFSRRLHAASRRS
AGPFVAVDCASLPESLIESELFGYEQGAFTGAKRKGMAGRIREAHGGVLFLDEIAEIPLA
LQTRLLRVLEERVVTPLGGGQGVAVDFDLVCATHGHLPSLVEAGRFRADLMYRVAGFTVE
LPALRQRNDRHALISRLFLEAGGAAKRLQLEADALEALAAWRWPGNVRELRSTLRAIVAL
ADAGDAVTAADLPAHLHTTPSSPPEPAPAHAAPQAEPLLAITRHAIDEALKACDHDVAKA
ARRLGVHRSTVYRHLARQRDKPTAH
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaagcgcagttgccgtcgatcgcagtggcccaggcccgggagctcttcttc
gggcagggccgcgaccccgcgccgtggatcgcgccgcacatctcgcgctcctggcagcgc
agccgcccggtcgaccaccaggccgtcgaccccgagccgatggcgctggcgctgctgagc
gaacggcgcgagcaggccatgcgcctcctgaactgcgcgcagcccgagctcgacggcctg
gccgagcatgcgatcggcaacggctgcgtggtgatcctttcggatgccagcgggctgatc
ctcgaggagatcggcagcgccgacttcctgcccaaggcacagcgcatcgcgctgcaaccc
ggcgtggaatggtcggagcacaaccggggcaccaacgccataggcaccgcgctggcggag
cgcgaggcgctgatggtgctgggcggcgagcactacctggcgcagaacggtggactcggc
tgcgctgcggcaccgatcttcacagggcgcggcgagctggcgggcgccctggacatctcc
ggcgaaacggtgcgcgtgaacacgcacgcgctggggctggtgcgcatggcggcccagcag
gtcgagcaccgcatgatgctggccgaggccggcggccacgtgctgcgcttccatgcgcgg
ccggcactgataggcactgcgcgcgagggcctgatggtgatcgagggcgggcgcatcgtc
gcggccaaccgcgtcgcgctcgaactcttcggccgctcctggaaagacctgctcgacctg
gacgccgaggatttcctcggcgcgaactggccacgcatggagcaccggcgcggcctgctc
acgctgccgggcgggaggcagatcgcgacggtgatggagcgctcgaacacgccgggcgcc
gctcgcccgccacagaggcgcggcgtggcgcaaaacgtggccgaggccgacgacgtgcag
ccgctgctgcacaaggcggtgcgggtgctgaacgaaggcgtctccgtactcgtcaacgga
gagaccggcagcggcaaggaagtgttctcgcgccgcctgcatgccgccagccggcgcagc
gcgggccccttcgtcgcggtggactgcgcgtcgctgcccgagtcgctgatcgaatccgag
ctgttcggctacgagcagggagccttcaccggcgcgaagcgcaagggcatggcgggccgt
atccgggaagcccatggcggcgtgctgttcctcgacgagatcgccgagatacctctggcc
ctgcagacgcggctgctgcgcgtgctcgaggagcgcgtggtcacgccgctgggcggcggc
cagggcgtggcggtggacttcgacctggtctgcgccacccatggccacctgccctcgctg
gtggaggccgggcgcttccgcgccgacctgatgtaccgggtggccgggttcaccgtcgag
ctgccggcgctgcggcagcgcaacgacaggcacgcgctgatctcgcggctgtttctcgaa
gcgggcggcgcggcaaagcgcctgcagctggaagccgatgcgctggaagcgctggccgcg
tggcgctggccgggcaacgtgcgcgaactgcgcagcacgctgcgcgccatcgtggcgctg
gccgacgcgggtgacgcggtgacggcggctgacctgccggcgcatctgcacacaacgccg
tcctcgccgcccgagcctgcgccggcacacgcagcgccgcaggccgagcccctgctcgca
atcacgcgccacgccatcgacgaggcgctgaaggcctgcgatcacgacgtggcgaaggcc
gctcgcaggcttggcgttcatcgcagcaccgtctaccgccatctcgcccgccagcgcgac
aagccgaccgcgcactga
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