Variovorax sp. W6: SFB74_20150
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Entry
SFB74_20150 CDS
T11181
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00260
Glycine, serine and threonine metabolism
vaw00630
Glyoxylate and dicarboxylate metabolism
vaw00670
One carbon pool by folate
vaw00785
Lipoic acid metabolism
vaw01100
Metabolic pathways
vaw01110
Biosynthesis of secondary metabolites
vaw01200
Carbon metabolism
Module
vaw_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SFB74_20150 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SFB74_20150 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SFB74_20150 (gcvP)
00670 One carbon pool by folate
SFB74_20150 (gcvP)
Enzymes [BR:
vaw01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
SFB74_20150 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
XVK56443
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Position
4419632..4422544
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AA seq
970 aa
AA seq
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MPTPALPSLQELENAEEFLARHIGIDAADEARMLPAIGSETRAELIDGIVPAAIRRAKPM
RLPAPVTEADALAELKAIASKNKVFRNFIGQGYYGNHTPGVILRNILENPAWYTAYTPYQ
AEISQGRMEALLNFQTMVCDLTGMAIANASMLDEATAAAEAMTLAKRSVKSKSNVFLVSG
DCHPQTIEVIKTRAAPLGIEVKVSTVSETLPHLMVSGAFFGVLAQYPATTGHVHDLRPLA
GHAHQCDAAFIVAADLLALTLLAPPGEWGADIVCGTTQRFGMPLCNGGPHAAYLACRDEF
KRSLPGRLVGVSVDTHGQPAYRLALQTREQHIRREKATSNICTAQVLPAVVASMYAVYHG
PDGLTRIAQRVAALTAVLAKGLSLMGREPVNATAFDSLTIRTAEDTQSIIERAQAAGVNL
RQRLQQHLGISLDETSTRADVETLWGLFAPAGKQAPRFDDLSGSTVPLIPEELRRTSAFL
THPVFNTHKSETAMLRYIRSLSDKDLALDRSMIPLGSCTMKLNATSEMIPITWPEFADIH
PFAPADQLQGYAQLDAQLRAWLCEATGYAGISLQPNAGSQGEYAGLLAIKSFHEAKGQGH
RNICLIPSSAHGTNPASAQMVGLQVVVTACDAQGNVDMDDLKRACEKHSANLAAVMITYP
STHGVFETRVKELCELVHEHGGRVYVDGANMNALVGVAAPGEFGGDVSHLNLHKTFCIPH
GGGGPGVGPVCVVEDLVPYLPGHATAGVSSNGVGAVSAAPLGNAAVLPISWMYCRMMGAK
GLQAATETAILSANYISARLKDHYPTLYASPNGHVAHECILDLRPLKDTSGVTAEDVAKR
LIDYGFHAPTLSFPVPGTLMVEPTESEPLAELDRFIDAMIAIRGEIRRIEEGVWPKEDNP
LKHAPHTAASLLGSEWSHPYSRELGAFPLAALKNAKYWPPVGRVDNVYGDRNLFCSCVPV
SEYSEEAEEA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcccgcccttccttctttgcaagaactagagaacgccgaagaattcctcgcc
cgccacatcggcatcgatgcggcggacgaggcgcgcatgctgccggcgatcggctcggag
acgcgcgccgagctcatcgacggcatcgtgccggcggccatccgccgagcgaagccgatg
cgcctgcccgcgccggtgaccgaagccgacgcgctggccgagctgaaggcgatagcgtcg
aagaacaaggtgttccgcaacttcatcggccagggctactacggcaaccacacgccgggc
gtgatcctgcgcaacatcctcgagaaccccgcctggtacaccgcctacacgccctaccag
gccgagatctcgcagggccgcatggaagccctgctcaacttccagacgatggtgtgcgac
ctcacgggcatggccatcgccaacgcgtcgatgctcgacgaagccacggccgcggccgag
gccatgacgctcgccaagcgcagcgtgaagagcaagagcaatgtgttcctggtctcgggc
gactgccatccgcagaccatcgaggtcatcaagacccgcgccgccccgctgggcatcgag
gtcaaggtgagcaccgtgtcggaaacgctgccgcacctgatggtgagcggcgccttcttc
ggcgtgctcgcgcagtaccccgccaccaccggccacgtgcacgacctgcgcccgctcgcg
ggccatgcgcaccagtgcgacgcggcattcatcgtcgcggccgacctgctggcgctgacg
ctgcttgcgcctccgggcgaatggggtgccgacatcgtctgcggcaccacgcagcgcttc
ggcatgccgctttgcaacggcggcccgcacgccgcctacctggcctgccgcgacgagttc
aagcgatcgctgccgggccgcctggtgggcgtgagcgtcgacacgcacggccagcccgcc
taccgcctcgcgctgcagacgcgcgagcagcacatccgccgcgagaaggccacttccaac
atctgtaccgcgcaggttctgccggccgtggtggccagcatgtacgccgtgtaccacggt
cccgatggcctcacgcgcatcgcacagcgggtggccgcgctcaccgcggtgctcgccaag
ggcctgtcgctgatgggccgcgagccggtgaacgccaccgccttcgactcgctgaccatt
cgcaccgcggaagacacgcagtcgatcatcgagcgcgcgcaggccgccggagtcaacctg
cgccagcgcctgcagcagcacctgggcatctcgctggacgagaccagcacgcgcgccgac
gtcgaaacgctgtggggcctgttcgcgcccgccggcaagcaggcgccgcgcttcgacgat
ctctcgggcagcaccgtgcctctgattcccgaggaactgcgccgcaccagcgcattcctc
acgcacccggtgttcaacacccacaagagcgagacggcgatgctgcgctacatccgcagc
ctgtcggacaaggacctcgcgctcgaccgcagcatgatcccgctgggcagctgcaccatg
aagctcaacgcgaccagcgagatgatccccatcacctggcccgagttcgccgacatccac
cccttcgcgccggccgaccagctgcagggctacgcccagctcgatgcccaactgcgcgcc
tggctgtgcgaagccaccggctatgcgggcatcagcctgcagcccaacgcgggctcgcag
ggcgagtacgcgggcctgctggccatcaagtccttccatgaggccaagggccagggccac
cgcaacatctgcctgattccttcctcggcacacggcaccaacccggccagcgcgcagatg
gtgggcctgcaggtggtggtgacggcctgcgacgcgcagggcaacgtcgacatggacgac
ctgaagcgcgcctgcgagaagcacagcgccaacctggccgccgtgatgatcacctacccc
agcacgcacggcgtgttcgagacccgcgtgaaggagctgtgcgaactggtgcacgagcac
ggcggccgtgtgtatgtcgacggcgccaacatgaacgcgctggtcggcgtggccgcgccg
ggcgagttcggcggcgacgtgagccacctgaacctgcacaagaccttctgcattccgcac
ggcggcggcggccccggcgtgggccccgtctgcgtggtggaagacctcgtgccctacctg
ccgggccatgccacggcgggcgtgtcgtcgaatggcgtgggcgccgtgtcggccgcgccg
ctgggcaacgcagccgtgctgccgatcagctggatgtactgtcgcatgatgggcgccaag
ggcctgcaggccgcgaccgagacggccatcctcagcgccaactacatcagcgcgcgcctg
aaggaccactaccccacgctgtacgcgagccccaacgggcacgtcgcgcacgagtgcatc
ctcgacctgcgcccgctcaaggacaccagcggcgtcaccgcggaagacgtggccaagcgc
ctgatcgactacggcttccacgcgcccacgctgagcttccccgtgcccggcacgctgatg
gtggagcccaccgagagcgagccgctggccgagctcgaccgcttcatcgacgcgatgatc
gccatccgcggcgagatccgccgcatcgaggaaggcgtctggccgaaggaagacaacccg
ctcaagcacgcgccgcacaccgccgcgagcctgctgggcagcgagtggagccacccgtac
tcgcgcgaactcggcgcgttcccgctggccgcgctcaagaacgccaagtactggccgccc
gtcggccgcgtcgacaacgtctacggcgaccgcaacctgttctgcagctgcgtgccggtg
agcgagtacagcgaggaagccgaagaggcctga
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