Variovorax sp. W6: SFB74_20395
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Entry
SFB74_20395 CDS
T11181
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
vaw Variovorax sp. W6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF3836
Motif
Other DBs
NCBI-ProteinID:
XVK56490
LinkDB
All DBs
Position
complement(4468604..4473247)
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AA seq
1547 aa
AA seq
DB search
MAGTEEKKAPTEREPQTAVAPLNTIVKEDIAAASKAVDDWLRSFSGGYVTLERLTMVLGS
IPIVGNIMALVDVFLDIINIVEKKAKDGVDAFLNWVSLGINLIGLIPIPPSMAAARMSLR
PTLHLVKQELKTAASNLGEAIVTTLVGHLNATIMGELDKFIDGAIAKLDGILKSCADLAD
KIIDNLVDVMRRVLGQKDLFTVAKPGAAETKVHDPKTQSTWSRMWGAAVRYSKQSANYVA
KAAASQLPDGIAGRINGVITQMLDFKRLLRGQLSRLADREAQASIMWLLHKLRDALLKKK
GKRAAIVPPQAGAKAEKEKPGTPLGHINKQAGAQGTGGCKNCPAPARKGASISLSTGNES
FTHTDFVLAAPLPIEWARTYASDLDAFDRGSLGARWITPYSMRVDVATPVRGARQGKASL
VHHAADGRSHAYPVLAVGQAYFDPIEEVTVSRLSENLLVLDFGKPLPEGEQSEWREIYEY
VDSKQPHFRLVTQQAKDGMSIGLRYDHVIASTGERVLSDVISKHGEAVMAHVGTKPDAQT
GLIQSLWELKDGQVVRQLAGYTHDGERDLVSAQDEDGASWSYTYSHHLVTRYTDRTGRAM
NLEYDGTDPDAKAVREWSDDGSFALKLEWDRNIRLTYVTDALGGETWHYYDIQGYTYRVI
HPDKLQEWFFRDDAKNVTRHVHTDGTTDDYTYDADGNLQTHTRADGSRVHYEYDRLHRLT
GIRDAEGGVWKRDYDAQGHLTEEIDPLGHKTEYAYDKAGRPVRITDAKGGVKALAYSASG
QMLSYTDCSAKTSHWEYDERGRLTKAIDAAGNATGYRYTAGQLEEIVQPDQTIEHFEHDA
EGRLLKHTDALGRATRYSYTRAGLIAGRTDAAGRSLKYYWDLLGRLTELHNENGSRYDFR
YDPVGRLLEETGFDRKATQYVHEETTGILAEVVEAGHRTELEFDPLGRLSERRAGEQSER
FAYDHNGRLLEATNSDARLQWFYDPAGNLTREHHHYVERKRTAVWQHRYDELNQRIATVR
PDGHVTQWLTYGSGHVHGLMIDGQDILGFERDDLHREIAREQGNGLSQRQKYDPAGRLLE
QQISRTRPGAIESTTGIQRRYSYDKAGQLVGIGDSRRGNLSYRYDPVGRLLEANSRIGRE
TFAFDPAGNIVDPPETNDPFRHPAGKLLDNLLKNYAGTSYRYDERGNMTERMRNGWRTVF
AWDGFNRMTAATDQSGITTNFSYDALGRRLSKSSGETTTLFGWDGDVLAFESTQSRSAIE
EGGEHGWSVHYIHEANSFVPLVQVRRASAMALSETTDAKALMEANGGAYDIEQDPLWNGE
QRHVPRAFERKEMAFYQCDHLGTPQELTNHEGSVAWSAQYKAWGEAREAISEAGRRAGFR
NPIRFQGQYWDEETGLHYNRYRYYDPQVGRFISSDPIKLLGGLNIFAYAKNSTAFIDPLG
LATTAPPTITASEITDKTRSEIRALAASKGLVATGQPDSAGLPRKWKCPCTGNQRLRLDR
GHIDQQTGLPYNDPKAAVDHVHGYQPDGLTKIVSPVDGNAHFPTKGP
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggcagggacggaagagaagaaagcgccgaccgagcgcgagccgcagacagcggtagca
ccgctgaacacgatcgtgaaggaagacatcgccgctgcgagcaaggcggtagacgactgg
cttcgttcgttcagcggcggctacgtgacgctggagcgcctgacgatggtgctgggcagc
atcccgatcgtcgggaacatcatggcgctggtggatgtgttcctggacatcatcaacatc
gtggagaagaaggccaaggatggggtcgatgcgttcctgaactgggtgagcctgggcatc
aacctgatcgggctgatcccgataccgccgagcatggcggcagcacgcatgagccttcgg
ccgacgctgcacctggtgaagcaggagctgaagacggcggcgtcgaacctgggcgaagcc
atcgtgacgacgctggtggggcacctgaacgccaccatcatgggggagctggacaagttc
atcgacggtgcgatcgccaagctcgacggcatcctcaagagctgcgcggaccttgcggac
aagatcatcgacaacctggtggacgtgatgcgccgggtgctggggcagaaggacctgttc
acggttgcgaagcccggtgcggcggaaacgaaggtgcacgacccgaagacgcagagcacg
tggagccggatgtggggagctgcggtgcggtactcgaagcagtcggcgaactacgtggcg
aaggcggctgcgagccagctgccggatggcatcgcgggccggatcaatggcgtgatcacg
cagatgctggacttcaagcggctgctgagggggcagctgtcgaggctggcggacagggag
gcgcaggcgagcatcatgtggctgctgcacaagctgcgggatgcgctgctgaagaagaag
ggcaagagggcggcgatcgttcctccgcaggcgggggccaaggcggagaaggaaaagccg
ggaacgccgctcggccatatcaacaagcaggccggagcccagggaaccgggggctgcaag
aactgccccgcaccggcacgcaagggggcttccatcagcctgagcaccggcaacgagagt
ttcacccacaccgatttcgttcttgccgcgccgctgccgatcgagtgggcacgcacctat
gcgagcgacctcgatgccttcgaccgtggcagccttggggcgcgctggatcactccgtac
agcatgcgcgtggacgttgccacgcctgtgcgcggcgctcgccagggcaaggcgagcctg
gtccaccacgcggccgacggccgcagtcatgcgtaccccgtgctggccgtggggcaggcc
tacttcgacccgatagaggaagtgactgtctcgcgcctgagcgagaacctgctggtgctg
gacttcggtaagcccctgcccgaaggcgagcagagcgagtggcgcgagatctacgagtac
gtcgacagcaagcagccgcacttccgtcttgtcacccaacaggcaaaggacggcatgtcc
atcggcctgcgctacgaccacgtgattgcctcgaccggtgaacgtgtgctgagcgacgtc
atcagcaagcacggcgaagccgtcatggcgcacgttggtacgaagcccgatgcgcagacc
gggctcatccagtcgctgtgggagctcaaggacggccaggtcgtacgccagttggccggc
tacacccacgacggcgagcgtgacctcgtgtcggcacaggacgaagacggcgcgagctgg
agctacacctacagccaccacctcgtgacccgctacaccgatcgcaccggccgggccatg
aacctggagtacgacggcaccgaccccgatgccaaggccgtgcgcgaatggtccgacgac
ggcagcttcgcactgaagctggagtgggacaggaacatccgcctgacctacgtgaccgat
gcgctgggcggtgagacctggcactactacgacatccaaggctacacatatcgggtcatc
catccggacaagctgcaggagtggttcttccgcgatgacgcaaagaacgtcacgcgccat
gtgcacaccgacggcacgaccgacgactacacctacgacgccgacggcaacctgcagacg
cacacccgggccgatggcagtcgggtgcactacgagtacgacaggctgcaccggctcacg
ggcatccgcgacgcggaaggcggcgtgtggaagcgcgactacgacgcgcagggccatctc
acggaggagatcgatccgctggggcacaagaccgagtacgcctacgacaaggccggcagg
cccgtgcgaatcaccgatgcgaagggcggcgtgaaagcgcttgcctattccgcatcaggg
caaatgctcagctacaccgactgctccgccaagaccagccactgggagtatgacgaacgg
ggccggctgaccaaagccatcgatgccgccggcaacgcgaccggataccgctacaccgcc
ggccagctcgaggaaatcgtgcagcccgaccagacgatcgagcatttcgagcacgacgcc
gaaggccggttgctcaagcacaccgacgcactcgggcgtgccacgcgctacagctacacg
cgcgccggcctgatcgccggccgtaccgacgccgcgggccgctcgctcaagtactactgg
gacctgctgggccgcctgaccgaactgcacaacgagaacggcagccgctacgacttccgc
tacgaccccgtgggtcgcctgctggaggagaccggcttcgaccgcaaggccacgcagtac
gtccatgaagaaaccaccggcatcctcgctgaagtggtcgaggcaggccatcgcaccgaa
ctcgaattcgacccgctgggccgcctgagcgaacgccgtgccggcgagcagtcagagcgc
ttcgcctatgaccacaacggccgccttctcgaggcgaccaacagcgacgcgcgcctgcag
tggttctacgacccggccggcaacctgacgcgcgaacatcaccactacgtggagcgcaag
cgcactgcagtctggcagcaccgctacgacgaactcaaccagcgcatcgccaccgtgcgc
cccgacgggcacgtcacccaatggctcacctacggctcaggccacgtgcacggcctgatg
atcgacggccaggacatcctgggcttcgagcgagacgacctgcaccgagagattgcgcgc
gagcagggcaacggactgagccagcggcagaagtacgacccagcgggtcgtctgctcgaa
cagcagatctcgcgcactaggcccggagccatcgaatcgaccaccggcatccagcgccgt
tacagctacgacaaggcaggccagttggtgggcatcggtgacagccggcgcggcaacctg
agctaccgctacgaccccgttggccgactgctcgaagccaacagccgcatcgggcgcgag
acgttcgcgttcgatccggccggcaacatcgtcgacccgccggagaccaacgacccgttc
agacacccggccggcaagctgctggacaacctgctgaagaactacgccggcaccagctat
cgctacgacgaacgcggcaacatgacggagcggatgcgcaacggctggcgcaccgtcttc
gcatgggacggcttcaaccgcatgacggcagcgaccgaccagagcggcatcaccaccaac
ttcagctacgacgcgttggggcgccgtctgtcgaagagctcgggcgagacgacgacgctg
ttcggttgggacggcgatgtgctcgccttcgagagcacgcagagcaggtccgcgatcgag
gagggtggcgagcacggctggagcgtgcactacatccacgaggcgaactcgttcgtgccg
ctggtgcaggtgcgccgggcgagcgcgatggcgctgagcgaaaccaccgacgctaaggcg
ttgatggaagccaacggaggcgcctatgacatcgagcaggatccgctgtggaatggcgag
cagaggcatgtgcctcgagcgttcgagaggaaggagatggcgttctatcaatgcgatcac
ctggggacgccgcaggaactgacgaaccacgaaggcagtgtggcctggtcggcgcagtac
aaggcgtggggagaggcgcgggaggcgatcagcgaggcggggagaagggcggggttcagg
aatccgatccggttccaggggcagtactgggatgaagagacggggctgcactacaaccgg
tatcgctactacgacccgcaggtagggcggtttatcagttctgacccaataaaactcctg
ggtggattaaatatttttgcgtatgcaaaaaattcaactgctttcattgacccactcgga
ttggcaacaacggcgccacctacgatcactgcatctgaaattacagacaagaccagatcc
gaaataagagcgttggctgcttccaagggattagttgcgaccgggcagccggattctgca
ggattacctcgtaaatggaaatgtccatgtaccggcaatcaaagattgcgcttggatcgc
gggcacattgatcagcaaactggattgccctacaacgacccgaaagctgctgtggatcac
gtacacgggtatcagccggatggtttgacaaaaattgtgtcgcctgtggatgggaatgcg
cattttccaacgaaaggaccatga
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