Variovorax sp. W6: SFB74_20540
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Entry
SFB74_20540 CDS
T11181
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00061
Fatty acid biosynthesis
vaw00071
Fatty acid degradation
vaw01100
Metabolic pathways
vaw01212
Fatty acid metabolism
vaw02024
Quorum sensing
vaw04146
Peroxisome
Module
vaw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SFB74_20540
00071 Fatty acid degradation
SFB74_20540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SFB74_20540
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFB74_20540
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vaw01004
]
SFB74_20540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vaw04147
]
SFB74_20540
Enzymes [BR:
vaw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SFB74_20540
Lipid biosynthesis proteins [BR:
vaw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SFB74_20540
Exosome [BR:
vaw04147
]
Exosomal proteins
Exosomal proteins of breast milk
SFB74_20540
Exosomal proteins of breast cancer cells
SFB74_20540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XVK56519
LinkDB
All DBs
Position
complement(4506544..4508103)
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AA seq
519 aa
AA seq
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MYLTQGLHRAVQQRPDAIAVRFAGRARTFRDFAERVARLAGALQRLGMQAGDRVAMLSLN
SDRYLEYQMAVPWGGGVLNPCNIRWSAAEILYSLEDSGSGILLVDETFRPVVEQMRGQSK
SLREVVYCGDGPVPAGMHSYEGLIDAAAPVPDAVRRGEDLAGIFYTGGTTGFPKGVMLSH
TNICSSALAAQAEGLAPADGCYLHAAPMFHLADMGLATPHWFTGNTHTIIPMFTPEGVLD
AIQRDRVTSLLLVPTMIQMLVDHPAMREPRDLSSLKNITYGASPISEAVLNRAMEAFPGV
GFVQAYGMTELSPIATLLPAELHTAEGRKRGKLRSAGRAAVCMEVRVVDADDNEVPRGTV
GEVAVRGPNVMQGYWNKPEQTAAALRDGWMHTGDGAYMDDDGFIFVVDRMKDMIISGGEN
VYSAEVENAINQHPAVAACAVIGIPSDEWGEAVHAVLVLKPGQGVQPDELIAHCKTLIAG
YKCPRSVAIVDALPLSGAGKVLKTRLREPFWQGRQRSVA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgacccagggccttcaccgggccgtgcagcagcgccccgacgccattgccgtg
cgcttcgccggccgcgcccggactttccgcgacttcgccgaacgcgtggcgcgcctggcc
ggcgcgctgcagcggttgggcatgcaggcgggcgaccgcgtcgccatgctgtcgctcaac
tccgaccgctatctggagtaccagatggccgtgccctggggcggcggcgtgctcaacccc
tgcaacatccgctggtcggccgccgagatcctgtattcgctggaagactccggctccggc
atcctgctggtcgacgagaccttccggcccgtggtcgagcagatgcgaggccagtcgaag
agcctgcgcgaagtcgtttactgcggcgacggccccgtgcctgccggcatgcacagctac
gagggcctgatcgacgccgcggccccggtgcccgatgctgtgcgccgcggcgaggacttg
gccggcatcttctacaccggcggcaccaccggctttcccaagggcgtgatgctgagccac
accaacatctgcagttcggcgctcgcggcgcaggccgaggggctggcgccggccgatggt
tgctacctgcatgcagcgccgatgttccacctggccgacatgggcctggccacgccgcac
tggttcacgggcaacacccacaccatcattccgatgttcacgcccgagggcgtgctcgac
gcgatccagcgcgaccgcgtgaccagcctgctgctggtgcccaccatgatccagatgctg
gtggatcaccccgcgatgcgggagccgcgcgacctgagcagcctgaagaacatcacctac
ggcgcctcgccgatttccgaagcggtgctcaaccgcgcgatggaggctttcccgggcgtg
ggcttcgtgcaggcctacggcatgacggagctgtcgcccatcgccacgctcctgcccgcc
gaactgcacaccgcggagggccgcaagcgcggcaagctgcgctcggccggacgcgccgcc
gtgtgcatggaagtgcgcgtggtcgacgcggacgacaacgaagtgccgcgcggcaccgtc
ggcgaggtggcggtgcgcggccccaacgtgatgcagggctactggaacaagcccgagcag
acggccgccgcgctgcgagacggctggatgcacaccggcgacggcgcctacatggacgac
gacggcttcatcttcgtggtcgaccgcatgaaggacatgatcatcagcggcggcgagaac
gtctattcggccgaggtcgagaacgccatcaaccagcatcccgcggtggccgcctgcgcc
gtcatcggcatcccgagcgacgagtggggcgaggcggtgcatgccgtgctggtgctcaag
ccggggcagggcgtgcagccggatgaactgatcgcccattgcaagacgctgattgccggc
tacaaatgcccgcgcagcgtggccatcgtcgatgcgctgccgctctcgggtgccggcaag
gtgctgaagacccggctgcgagagcccttctggcagggccggcagcgaagcgtggcctga
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