Variovorax sp. W6: SFB74_22295
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Entry
SFB74_22295 CDS
T11181
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaw03000
]
SFB74_22295
Transcription factors [BR:
vaw03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SFB74_22295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
MarR
HTH_27
HTH_24
DprA_WH
Rrf2
TrmB
HTH_5
HTH_11
HTH_Crp_2
HTH_PafC
GAF_2
HTH_20
HTH_26
Tautomerase-like
HTH_36
Stirrup
Sulfolobus_pRN
DUF4423
DUF6262
Motif
Other DBs
NCBI-ProteinID:
XVK56858
LinkDB
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Position
4874449..4875276
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AA seq
275 aa
AA seq
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MSDTTGAQSVKSIDALRRGLDVMLAIQRSSAVTLQELHRQTGLSKATLLRILKTLQQAGW
AERSEHDRRYVPTSATGQSGPAAAWRTRLSALAAPARATLQRVVPWPIDLGVRDGTAMLI
LDTDRPRNGLAVNYRALGFRPPMLLSSLGRCYLSFCPEDERREILAALARSPTDFDRSAR
RPENIRRMVAHARDLGYVTRDPTSTSMDSPDRFGAISVPLRQGERVVGCLSCAWLPAVKN
EREIVLAHLGDLQQAAQNIERKLAQTGFELPPASA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaccacgggcgcgcagagcgtgaaatccatcgacgcattgcgccgcgggctc
gacgtgatgctggccatccagcgctcctcggccgtcacgctgcaggagctgcaccggcag
acaggcctgtcgaaggcgacgctgctgcgcatcctcaagacgctgcagcaggccggctgg
gcagagcgcagcgagcacgaccggcgctacgtacccacctcggccacagggcagtcgggg
ccggcggcggcatggcgcacgcgactgtcggcacttgctgcgcccgcgcgcgccacgctg
cagcgcgtggtgccatggcccatcgacctgggcgtgcgcgacggcacggccatgctcatc
ctcgacaccgacaggccgcgcaacggactggccgtcaactaccgcgcgctgggctttcgt
ccgccgatgctgctgtcctcgctggggcgctgctatctctcgttctgcccggaagacgag
cgccgcgagatcctcgccgcgctggcgcgttcgccgaccgatttcgaccgcagcgcgcgg
cgccccgagaacatccgccgcatggtggcgcatgcgcgcgatctcggctacgtgacgcgc
gacccgacctcgaccagcatggattcgcccgaccgcttcggcgcgatctcggtgccgctg
cgccagggcgagcgggtggtgggctgcctcagctgcgcctggctgccggcggtgaagaac
gaacgcgagatcgtgttggcccacctgggcgacctgcagcaggcggcgcagaacatcgag
cgcaagctggcgcagaccggcttcgaattgccgcctgcatctgcctga
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