Variovorax sp. W6: SFB74_25210
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Entry
SFB74_25210 CDS
T11181
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vaw Variovorax sp. W6
Pathway
vaw02020
Two-component system
vaw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFB74_25210
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SFB74_25210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vaw03021
]
SFB74_25210
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vaw02035
]
SFB74_25210
Transcription machinery [BR:
vaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SFB74_25210
Bacterial motility proteins [BR:
vaw02035
]
Flagellar system
Flagellar assembly proteins
Stator
SFB74_25210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
MarR_2
Motif
Other DBs
NCBI-ProteinID:
XVK57420
LinkDB
All DBs
Position
complement(5556107..5556841)
Genome browser
AA seq
244 aa
AA seq
DB search
MYTAQGTIEKSHLLAQHQPLVRRIALQMMAKLPASVELDDLIQAGMLGLLDASARYQDNR
GAQFETFVSQRIRGAMLDELRAADWGSRGLRQSARGIEKAMQALGHRLGRAPTEGEIARE
LKMDIEAYQSLLQEIQGCQLLYVEDFSKDDADNGFLDSHSQDARKDRRSSDDPLEQLLES
GFRHQLVDAISALPERDQLLLNLYYEEELNLREIGAILEVSQSRVCQLHSQAISRLRAKL
KDLL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgcacaaggaaccatcgagaaatcgcacctgctcgcgcagcaccagccgctg
gtgcgccgtatcgcgctgcagatgatggcgaagctgccggccagcgtggagctggacgac
ctgatccaggccggcatgctgggcctgctggacgcatccgcacgctaccaggacaaccgc
ggcgcccagttcgagactttcgtgagccagcgcatccgcggcgcgatgctcgacgagctg
cgcgccgccgactggggctcgcgcggcctgcgccagtcggcgcgcggcatcgagaaggcg
atgcaggcgctgggccacaggctcgggcgtgctcccaccgaaggggagatcgccagggaa
ctgaagatggacatcgaggcgtaccagtcgctgctgcaggagatccagggctgccagctt
ctttacgtcgaggacttctccaaggacgatgccgacaacggttttctcgacagccattcg
caggatgcgcgcaaggaccggcgcagcagcgacgacccgctggaacagctgctggaaagc
ggcttccgccaccagctggtggatgccatctcggcgctgcccgagcgcgaccagctgctg
ctgaacctctactacgaggaagagctgaacctgcgcgagatcggcgcgatcctcgaggtg
agccagtcgcgcgtctgccagctgcacagccaggcgatcagcaggctgcgggcgaagctg
aaggacctgctctag
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