Variovorax sp. W6: SFB74_26960
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Entry
SFB74_26960 CDS
T11181
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaw03000
]
SFB74_26960
Transcription factors [BR:
vaw03000
]
Prokaryotic type
Helix-turn-helix
XRE family
SFB74_26960
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XVK57753
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Position
5912583..5914004
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AA seq
473 aa
AA seq
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MSKTFMGVRLRKLRAERGMTQVALAQALGLSPSYLNQIEQNQRPLTVAVLLKISRTLGVD
VQQFSEDEEARLVSSMRDALADNPGGEAVALPELREVASQMPAVARALLALHRRHQEAME
RLEIMATELGDGRGELTNARPMPFEAVRDFFFAHQNHFEELDLQAERLADEARGHGGPLS
GWLQQRLLEQHGVRVVPTDDDAIDSQRRYDPATRVLRLSAGLEPGQQSFQLATQLALLEQ
TRLIESLLEGAGFNDAPTHALARIGLANYFASAVLLPYGLFLKAAESLRYDIDLLARRFG
VGFETVCHRLSSMQRPGAPGVPFFFIRVDRAGNISKRQSATHFHFSKTGGTCPLWNVYEA
FAQPGRVLRQLARMPDGRTYLWVARTVSHGQRGFDSPSKTFAIGLGCDIRHAPRLIYSKG
LDLTDQDVPTPIGMGCKVCERVACPQRAFPFIGRALDVNENESRFTPYAVADA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccttcatgggcgtgcgcctgcgcaagctgcgcgccgaacgcggcatgacg
caggtggcgctggcccaggcgctgggcctgtcgcccagctacctgaaccagatcgagcag
aaccagcggccgctcacggtcgccgtgctgctcaagatcagccgcacgctgggcgtcgac
gtgcagcagttttctgaagacgaggaagcccgcctcgtctcgagcatgcgcgatgcgctg
gccgacaaccccggcggagaagccgtcgcgctgcccgagctgcgcgaagtggcctcgcag
atgcccgcggtggcgcgcgccctgctcgcgctgcaccgccgccaccaggaagcgatggag
cgcctggagatcatggccaccgagctcggcgacggacgcggcgagctcacgaatgcgcgc
cccatgcccttcgaggccgtgcgcgacttcttctttgcccaccagaaccatttcgaggag
ctggacctgcaggccgaaaggctcgccgacgaggcgcgcggccacggcggcccgctgtcc
ggatggctgcagcagcggctcctggagcagcacggcgtgcgcgtggtgcccaccgacgac
gacgccatcgacagccagcgccgctacgaccccgcaacccgcgtgctgcgcctgtcggct
ggcctggagccgggccagcagtcgttccagcttgcgacccagctggcgctgctggagcag
acgcggctgatcgaatcactgctggaaggcgccggcttcaacgacgcgccgacgcatgcg
ctggcccgcatcgggctggcgaactacttcgccagcgcggtgctgctgccctacggcctg
ttcctgaaggccgcggaaagcctgcgctacgacatcgacctgctggcgcgccgcttcggc
gtcggcttcgagacggtgtgccatcgcctgagctccatgcagcggcccggcgcgcccggc
gtgcctttcttcttcatccgggtggaccgcgcgggcaacatctcgaagcggcagtcggcc
acgcacttccacttctccaagaccggtggcacctgcccgctgtggaacgtgtacgaggcc
ttcgcgcagcccgggcgcgtgctgcggcaactcgcgcgcatgcccgacggacgcacctac
ctgtgggtggcgcgcacggtgtcgcatggccagcgcggcttcgactcgcccagcaagacc
ttcgccatcggactgggctgcgacatccgccatgcgccgcgcctgatctattccaaggga
ctggacctgaccgaccaggacgtacccacgcccatcggcatgggctgcaaggtgtgcgag
cgcgtggcctgcccgcagcgggcgttcccgttcatcgggcgtgcgctggacgtgaacgag
aacgaaagccggttcacgccctacgcagtggccgacgcgtag
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