Variovorax sp. W6: SFB74_27460
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Entry
SFB74_27460 CDS
T11181
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vaw Variovorax sp. W6
Pathway
vaw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFB74_27460 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaw03400
]
SFB74_27460 (mutM)
Enzymes [BR:
vaw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SFB74_27460 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SFB74_27460 (mutM)
DNA repair and recombination proteins [BR:
vaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SFB74_27460 (mutM)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XVK62254
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Position
complement(6009890..6010702)
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AA seq
270 aa
AA seq
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MPELPEVEVTRRGFADRIAGGRIEAVRIGKPLRWALMVLPEALVGRQVREVRRRGKYLLI
DLDRGILLLHLGMSGSLRFDAALPPPGPHDHFDLVTNRGTLRLNDPRRFGAVVYVEDESA
PWAIKLLGGLGMEPLDEGFDLDAFHAGLRKRKTAVKQVLLAGDVVVGVGNIYASEALFQA
GIRPTLSAARISRPRAAKLHAAVREILARAVEKGGSTLRDFSNVDGQNGYFQLEATVYGR
AGEPCRVCATPIRLLRQGQRSTYYCPNCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctacccgaagtcgaagtcacccgccgtgggtttgccgaccgcatcgcaggc
gggcgcatcgaagcggtgcgcatcggcaagcccctgcgctgggcgctgatggtgctgccc
gaggcgctggtcggacggcaggtgcgcgaggtgcgccggcgcggcaagtacctgctgatc
gatctcgaccgcggcatccttctgctgcacctgggcatgtcgggcagcctgcgcttcgat
gccgcgctgccgccgcctggcccgcacgatcacttcgatcttgttaccaaccgcggcacc
ctcaggctcaacgacccgcgccgcttcggtgcagttgtttacgtggaagacgagtccgcg
ccttgggcaataaagctgctgggcggccttggcatggagccgctggacgagggtttcgac
ctcgacgcctttcatgccggcctcaggaagcgcaagaccgccgtcaagcaggtgctgctg
gcgggcgacgtggtggtgggcgtgggcaacatctacgcgtcggaggcgttgttccaggcg
ggcatccggccgacgctgtcggcggcgcgcatcagccgtccacgagccgcgaagcttcat
gcggcggtgcgcgagatcctggcgcgggcggtggagaagggcggcagcacgctgcgcgat
ttctccaatgtggacggacagaatggctatttccagctcgaagcgactgtctacggccgg
gccggcgagccctgtcgggtttgcgcaacgccgatccggctgttgcgccaggggcagcgc
tccacctattactgccccaactgccagaagtag
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