Variovorax sp. W6: SFB74_27670
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Entry
SFB74_27670 CDS
T11181
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vaw Variovorax sp. W6
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vaw03021
]
SFB74_27670 (rpoH)
Transcription machinery [BR:
vaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SFB74_27670 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
XVK57883
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Position
6050513..6051454
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AA seq
313 aa
AA seq
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MTTLSGVSANQLAVANPWSMVPPLGNLDAYISAANRLPMLTLEEEQGYARKLRDHNDLEA
AGALVLSHLRLVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYAMHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKADSAAADNGTHRETLSPDEVSQ
MASRLNVKPEEVLEMETRLSGGDVMLDPGPTDDGDEAFGPIAYLADASQEPTALLESQQR
DRLSSDGIATALEALDDRSRRIVEERWLKVNDDGSGGMTLHDLAAVYGVSAERIRQIEVA
AMKKMKKALAEYA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgctgtctggagtctctgccaaccagctggccgtcgccaacccgtggtcgatg
gttcccccgctgggcaacctggacgcctatatttcggccgccaaccgcctgcccatgctc
acgctcgaagaagagcaaggctacgcacgcaagctgcgcgaccacaacgatctcgaagcc
gccggagcactcgtgctgtcgcacctgcgcctcgtggtctccatttcccgccagtacctg
ggctacgggctgccgcacggcgacctgatccaggaaggcaacgtcggtctcatgaaggcc
gtgaagcgcttcgaccccgaccagggcgtgcgactcgtgagctacgccatgcactggatc
aaggccgagatccacgagtacatcctgaagaactggcgcatggtcaaggtcgcgacgacc
aaggcccagcgcaagctgttcttcaacctgcgctcgatgaagcagggcttcaaggccgac
tcggccgctgccgacaacggcacgcaccgcgaaacgctgagccccgacgaggtctcgcag
atggcgagccgcctgaacgtcaagcccgaagaagtgctcgagatggaaacccgcctgtcc
ggcggcgacgtgatgctcgacccgggcccgacggacgacggcgacgaagccttcggcccc
atcgcctacctggccgacgcctcgcaggaacccaccgccctgctcgaatcgcagcagcgc
gaccgcctgtcgagcgacggcatcgcgaccgcgctcgaggcgctggacgaccgcagccga
cgcatcgtcgaagagcgctggctcaaggtcaacgacgacggttcgggcggcatgacgctg
cacgacctggctgccgtgtatggcgtgagcgccgagcgcatccgccagatcgaagtggcg
gccatgaagaagatgaagaaggccctcgcagaatacgcgtaa
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