Variovorax xiamenensis: SFB74_28175
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Entry
SFB74_28175 CDS
T11181
Name
(GenBank) type II and III secretion system protein family protein
KO
K02280
pilus assembly protein CpaC
Organism
vaw Variovorax xiamenensis
Pathway
vaw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFB74_28175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vaw02044
]
SFB74_28175
02035 Bacterial motility proteins [BR:
vaw02035
]
SFB74_28175
Secretion system [BR:
vaw02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
SFB74_28175
Bacterial motility proteins [BR:
vaw02035
]
Pilus system
Pilus assembly proteins
SFB74_28175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
XVK57978
LinkDB
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Position
6142909..6144297
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AA seq
462 aa
AA seq
DB search
MHTTPREQSTRATRSLMNTSSRLLRPSLIALCAMTQAVWPLASMAADAQPARAQAQRPIV
LGAGTQQELVIDKGIDRMAIGDEAVAGVTITRKTPNSPAARLIVTGKAAGRTSLMVWEKG
NSAATSYVIEVRRRTAMLAGSMDSMTAHQQARDTALASTADKADLIDRSIVNVRSSTVQV
EVKVVEFNRSVLKQAGLNIFSTRPNSSGFSFGVFSPSSLGSASFSSNGQISGEYNNPLAQ
AFSLLFNFSKAGIGMNVGFLEGNGMARVLAEPTLVALSGQSASFLAGGELPIPVPQGLGT
TSIEYKPFGIGLTLTPTVLSNERIVLKVAPEASDLDYTNSLSLNGVAVPAITTRRADTTV
ELGDGESFIIGGLVSRTTTSNADKVPLLGDLPILGTFFSKNNYQMKEKELVILVTPHLVK
PIARGTDLTPYLPGTAEQRDGAVWRSYFLGGAADTAVPGFSR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccacgcctcgcgagcagtcgacacgtgccacgcgcagcctcatgaacacctcg
tcgcggctgctacgcccgtctctgatcgccctgtgcgcgatgacacaagccgtctggccg
ctggcatcgatggcagcagacgcacagccggcacgcgcgcaagcgcaacgccccatcgtg
ctgggcgctggaacgcagcaggaactggtgatcgacaagggtatcgaccgcatggccatc
ggcgacgaggccgtggccggcgtcaccatcacgcgcaagacgccgaactcgcctgcggca
cggctgatcgtgaccggcaaggccgcagggcgtacctcgctgatggtctgggagaagggc
aactcggcggccaccagctacgtcatcgaggtgcgccgacgtacggcaatgctggccgga
tcgatggacagcatgaccgctcaccagcaggcgcgcgacacggcactggccagcaccgcc
gacaaggccgacctgatcgaccgctcgatcgtgaacgtgcgcagcagcaccgtccaggtc
gaagtgaaggtggtggaattcaatcgcagcgtgctcaagcaggccggcctgaacatcttc
agtacgcggcccaactccagcggtttcagcttcggcgtgttctcaccgtcctcgctcggt
tccgcaagcttctcgtccaacggccagatcagcggcgaatacaacaatccgctggcacag
gctttcagccttctcttcaacttcagcaaggccggcatcggcatgaacgtcggcttcctc
gagggcaacggcatggcccgcgtgctcgccgagcccacgctggtggcgctgtcgggccag
agcgcgagcttcctggccggtggcgaactgccgatcccggtgccacagggcctgggcacc
accagcatcgaatacaagcctttcggcatcggcctcacgctgacgcccacggtgctgtcg
aacgagcgcatcgtgctcaaggtggcaccggaggccagcgacctcgactacaccaattcg
ctgagcctcaatggcgtggcagtgcccgccatcaccacgcgccgcgccgacaccaccgtc
gagttgggcgatggcgagagcttcatcatcggcggcctcgtgagccgcaccaccacctcg
aacgcggacaaggtgccgctgctcggcgacctgccgatcctgggcaccttcttcagcaag
aacaactaccagatgaaggagaaggaactggtgatcctggtcacgccgcacctggtcaag
cccatcgcgcgcggtaccgacctcacaccgtatctgcccggcaccgccgagcagcgcgac
ggcgccgtgtggcgctcgtacttcctcggcggagcggccgacaccgccgtccccggcttc
tcccgctga
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