Variovorax sp. W6: SFB74_28930
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Entry
SFB74_28930 CDS
T11181
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vaw Variovorax sp. W6
Pathway
vaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SFB74_28930 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaw03400
]
SFB74_28930 (ruvB)
Enzymes [BR:
vaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFB74_28930 (ruvB)
DNA repair and recombination proteins [BR:
vaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SFB74_28930 (ruvB)
RecFOR pathway proteins
SFB74_28930 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
nSTAND3
AAA_14
AAA_22
AAA_3
Rad17
AAA_18
TsaE
AAA_2
RNA_helicase
NTPase_1
AAA_33
AAA_17
AAA_28
ABC_tran
bpMoxR
NB-ARC
DUF815
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XVK58123
LinkDB
All DBs
Position
complement(6312856..6313920)
Genome browser
AA seq
354 aa
AA seq
DB search
MTIQTDDFAPAPQRVVSAAPASPNEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKR
QEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEPNDVLF
IDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPL
RDRFGIVARLEFYTPEELALIVHRSAGLLKVEADPAGGFEIARRSRGTPRIANRLLRRVR
DYAEVKGNGRITEDIAHRALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNVAASIG
EERDTIEDVIEPYLIQQGYLQRTPRGRIATLAAYRHLGVAPPSGRADGPDLFGA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccagacagacgacttcgcgcccgccccccaacgcgtggtgtccgccgcccct
gcctcgcccaacgaggaggcgatcgaacgggccctgcgccccaagctgctcgacgagtac
gtcggccaggccaaggtgcgcgagcagctcgagatcttcatcggcgccgcgcgcaagcgg
caggaagccctcgaccacgtgctgcttttcggcccgccgggcctgggcaagaccacgctg
tcgcacatcatcgccgccgagctgggcgtcaacctgcgccagacctccggccccgtgctc
gagaagcccaaggacctggcggcgctcttgaccaacctcgagccgaacgacgtgctcttc
atcgacgagatccaccgcctgagcccggtcgtcgaggaaatcctgtatccggcgctggag
gactaccagatcgacatcatgatcggcgagggccccgcggcgcgcagcatcaagctcgac
ctgcagcccttcacgctggtaggcgccaccacccgcgccggcatgctgaccaacccgctg
cgcgaccgcttcggcatcgtcgcgcggctggagttctacacgcccgaggaactggcgctg
atcgtgcaccgcagcgccggcctgttgaaggtggaggccgacccggccggcggcttcgag
atcgcccgccgctcgcgcggcacgccccgcatcgccaaccgcctgctgcgccgcgtgcgc
gactacgccgaggtcaagggcaacggccgcatcaccgaagacatcgcgcaccgggcgctg
gccatgctcgacgtcgacccgcagggcttcgacctgatggaccgcaagctgctcgaggcc
gtcatccaccgcttcgacggcggcccggtcggcctggacaacgtggccgccagcatcggc
gaggagcgcgacaccatcgaggacgtgatcgagccgtacctcatccagcagggctacctg
cagcgcacgccgcgcgggcgcatcgcaacgctggccgcgtaccgccacctcggcgtggcc
ccgccttccggccgcgccgacggtcccgatctctttggagcctga
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